Gene Shewana3_2713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2713 
Symbol 
ID4479117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3242653 
End bp3244479 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content53% 
IMG OID639727319 
Productpeptide synthase 
Protein accessionYP_870346 
Protein GI117921154 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGGG TGGAGGATGC GCAGCTCGGC CATGGGACAT CTAGCGTCGA GCAAGCAAGC 
GATGCCAATA TTTGTCGGCA TTTAAAGCAG GCCGCCCATC ACATTCCCCA TCATCTTGCG
GTTGCGGTGC AACAGGGCAA GGGTAAATCC CTTGCCAATC TGACTTACCA AGAACTCGAC
TTTATTAGCC TCGATAAACA AAGCGATGCC ATCGCCTTCG CGCTCAATGC CCATGGGCTG
ACGCGGGGGA TGAAGGCGGT GCTGATGGTC ACCCCGAGTC TGGATTTTTT TGCGTTAACT
TTCGCCTTGT TCAAGGCGGG AATTATTCCC GTACTGGTTG ACCCGGGCAT GGGGATTAAA
AACCTTAAGC AATGTTTTAT TGAAGCTGCG CCCGATGCCT TTATCGGGAT CCCTAAAGCC
CATATCGCCA GACGCTTATT AGGCTGGGGC AAGGGCAGCG TGAAGCACCT TATCAATGTG
GATGGCAATC CAAGCGGACT GGCAGGCACT TTATCGCGCG TACTCACGGG CGCGCCAAGT
TTAGCGACGA TACTCTTATC AACTGCTAAG TCGTTTACAA CGAAGGCATC TGCGGCAAAC
TTGCCGGAAC AGGGCGAGTA CCCAATGGCA CTGCTTAGGC ATGACGAGAT GGCGGCGATT
CTGTTTACCA GCGGCAGCAC GGGGACGCCG AAAGGCGTTG TCTATAGTCA CGGCATGTTT
GAGGCGCAAA TTCAGGCGCT AAAGCAAGAT TATGGCATTG CACATGGTGA GCGTGATTTG
GCGACATTCC CGCTATTCTC CCTCTTTGGT CCTGCGCTCG GTATGGCATC GATTGTACCT
GAGATGGATG CCAGCAAACC TATTACGGCC AATCCTGAAT TTTTATTTGC CGCCATTGAG
AAGTACCAAT GCAGCAATAT CTTTGTTAAT CCAGCCTTGC TTGAACGTTT AGGTCGCGCC
GGTGAGCAAA CCGAATCGAA AAAGCAGCAC AAACTCAGCA GTGTGAAACG CGTGATTTCC
GCAGGGGCGC CCGCGACCAT TGCCTCGATT GCCCGTTTTA GCAAAATGCT CGGTGTCGGC
GTGCCTGTAC TCAACTCCTA CGGCGCCACT GAATCCTTAC CCATCAGCAT GATCGCCAGC
GACGAACTAT TGACCACGAC TCAAACCACG GACAATGGCG GTGGAATTTG TGTCGGCCGC
GCCATCGATG GTGTCAGTAT CGAGATTATC GGCATCACTG AAGCTGATAT CCCTGAGTGG
GATAATGGCT TGCGTCTTAA CGCGGGGGAA ATTGGCGAGA TAGTGGTAAC AGGCCCTATG
GTGAGCCAGT CCTATTATCG CCGCGAAAAG GCAACGACGG CGGCCAAAAT TTGGGACCGC
GAGCGGCAAA CCTTTAGGCA TAGAATGGGT GACCTTGGCT ACCTGGACGA CAGCGGCCGA
TTGTGGATGT GTGGCCGCAA AGCCCATAGA GTGGATGCCA CCCAAGGCGG GCAGTGTATT
AAACGTTACT ATTCCATTCC GAGTGAGCGT ATTTTTAATA CCCATCCGAA TGTGAAGCGC
TCGGCGTTAG TGGGGATCAA AGTGAAGGGG CAAGGTGGCG TGTGTGAGAT TGAACCACTC
ATCTGCATCG AGCTTGACCA ATCCTTGGTG TGCAATAAGA GCGCGCAGCT CTATCAAGAG
TTGATGGCGA TTGCCGAGCA GTATAGCCAA ACTCAGGGGA TTCGGCGTTT TCTCATTCAT
CCCGATTTCC CCGTGGATGT GCGCCACAAT GCCAAAATAT TTAGAGAAAA ATTAGCCGTT
TGGGCGCAAT CGCAAACCAA AGGCTGA
 
Protein sequence
MARVEDAQLG HGTSSVEQAS DANICRHLKQ AAHHIPHHLA VAVQQGKGKS LANLTYQELD 
FISLDKQSDA IAFALNAHGL TRGMKAVLMV TPSLDFFALT FALFKAGIIP VLVDPGMGIK
NLKQCFIEAA PDAFIGIPKA HIARRLLGWG KGSVKHLINV DGNPSGLAGT LSRVLTGAPS
LATILLSTAK SFTTKASAAN LPEQGEYPMA LLRHDEMAAI LFTSGSTGTP KGVVYSHGMF
EAQIQALKQD YGIAHGERDL ATFPLFSLFG PALGMASIVP EMDASKPITA NPEFLFAAIE
KYQCSNIFVN PALLERLGRA GEQTESKKQH KLSSVKRVIS AGAPATIASI ARFSKMLGVG
VPVLNSYGAT ESLPISMIAS DELLTTTQTT DNGGGICVGR AIDGVSIEII GITEADIPEW
DNGLRLNAGE IGEIVVTGPM VSQSYYRREK ATTAAKIWDR ERQTFRHRMG DLGYLDDSGR
LWMCGRKAHR VDATQGGQCI KRYYSIPSER IFNTHPNVKR SALVGIKVKG QGGVCEIEPL
ICIELDQSLV CNKSAQLYQE LMAIAEQYSQ TQGIRRFLIH PDFPVDVRHN AKIFREKLAV
WAQSQTKG