| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2710 |
|---|
| Symbol | |
|---|
| ID | 4479114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 3239622 |
|---|
| End bp | 3240599 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639727316 |
|---|
| Product | integral membrane protein TerC |
|---|
| Protein accession | YP_870343 |
|---|
| Protein GI | 117921151 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTTT TAACCACGCT ATTTGTGGGT TACCCAATAT GGGTTTGGTT AATGTTTTTT
GGCTTTGTGC TGGCATTGTT AGCCTTCGAC TTAGGTGTGC TACATAAAGA GCAACACGAA
ATTACCGTGG CAGAGAGCCT TAAATTATCG GCCTTTTACA TTTGTATGGG TCTGTTGTTC
GGCGCTTGGT TATGGTGGTA TAAGGGCTCG ACCGCGGGGA TGGAATACCT CACGGGTTAC
CTTATCGAAA AATCCTTATC TATGGATAAC GTCTTCGTTA TCGCGCTTAT TTTCAGTAGC
TTAGGCATTC CTCGTTTGTA TCAACACCGA GTGTTATTCT GGGGGATCAT GGGCGTTATC
GTGCTACGTG CGATTATGAT TGGCTTAGGC GCGGCGCTGG TAGCGCAATA CCAAGGCGTG
TTGGTGTTAT TCGGCCTGTT CTTGATTTTC ACGGGTATTA AGATGCTCTT TTCCGATGAT
GAGCATGGTG ATATCCAAGA TAATAAGTTT TACAAATGGT TACGCTCCAA AATGCGTTTT
ACGCCAAGCC TTCATCAAGA GAAGTTTTGG GTAAGGGGAG AGGAGCATCA ACTCAGCAAA
GGCTGGTGGG CAACGCCTCT GTTCTTGGCG TTGATCTTAG TCGAAACCGC GGATCTGGTG
TTTGCAGTGG ACAGTATCCC TGCGATTTTT GCGATTACCC AAGATCCCTT TATCGTCTAT
ACCTCTAATA TTTTTGCGAT TTTAGGTCTG CGGGCATTGT ATTTCGCCCT CGCGGCCATG
GTGCATCGTT TCGAGTACCT CAAGTATGCG CTATCGGTGG TGTTAGTATT TATCGGCGTG
AAAGTCGGAC TGGTATACTT TAATCACGAA GGCATTGTGG ACTTTAAGAT CCCAACGGCC
TTATCCCTTG GCGTCACCTT CGGCCTCTTG CTGGCGGGGG TATTATTCTC CCTGTGGAAG
ACGCGCGAGC AGAAGTAA
|
|---|
| Protein sequence | MEFLTTLFVG YPIWVWLMFF GFVLALLAFD LGVLHKEQHE ITVAESLKLS AFYICMGLLF
GAWLWWYKGS TAGMEYLTGY LIEKSLSMDN VFVIALIFSS LGIPRLYQHR VLFWGIMGVI
VLRAIMIGLG AALVAQYQGV LVLFGLFLIF TGIKMLFSDD EHGDIQDNKF YKWLRSKMRF
TPSLHQEKFW VRGEEHQLSK GWWATPLFLA LILVETADLV FAVDSIPAIF AITQDPFIVY
TSNIFAILGL RALYFALAAM VHRFEYLKYA LSVVLVFIGV KVGLVYFNHE GIVDFKIPTA
LSLGVTFGLL LAGVLFSLWK TREQK
|
|---|
| |