| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2707 |
|---|
| Symbol | |
|---|
| ID | 4479111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 3235137 |
|---|
| End bp | 3236858 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639727313 |
|---|
| Product | phosphoglucomutase/phosphomannomutase alpha/beta/subunit |
|---|
| Protein accession | YP_870340 |
|---|
| Protein GI | 117921148 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1109] Phosphomannomutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACCC ATTTGCAATT ACAGGTTAAG CATTGGCTCG AAAATGACCC CGATCCCCGC
ACTCAGGCAC AACTGCAAGC CTTAATCGAC GCCGGAAATG ACGCCGAACT CGAGGCTCGT
TTTGCGGGAC GTTTAGAATT TGGTACCGCC GGATTACGCG GTGTGGTGGG CGCTGGTCCT
ATGGGCATGA ATCGCCTAGT GATCCGTCAA ACATCTGCTG GGCTTGGTGC CTATTTACTC
GAACAAATTA AAGATGCCGC AGAACGTGGT GTCGTGATTG GTTACGATGG CCGCCATGAT
TCACGCACTT TCGCCCATGA TACCGCCAGT GTGCTTACCG CGATGGGTAT TAAGGTGCGC
CTCACCGCCA AAGTGGCGCC AACGCCGCTG GTGGCCTTTG GGGTTAAGCA TTTTAATGCC
GCTGCGGGCA TTGTGGTGAC CGCCAGCCAT AACCCGCCAC AATACAATGG CTACAAAGTG
TATTGGGAAA ACGGCGCACA GATTATCCCG CCCCATGACT CTGGTATCGC CGCTAAGATT
GAGCTGGCGG CAACTCAAGC TATTCCGTTT ATGGATCAGG TTGAGGCGAC CAAACAGGGC
AAGCTTATCT GGTTGCAGGA CGATTATTAC GAAACCTATC GCCGCGGCGT GATGCACGCC
AATGTGCTGC AAAATAACAC TGCGCCCGAA AAAGTCAGCC TTGCCTATAC CGCCATGCAC
GGTGTGGGCG CTGAAATGGC GGAAACTGTG CTCAAGGATG CGGGTTTTGC CCAAGTGTAT
TCGGTGGTGG CGCAGCGCGA GCCCGATGGG GATTTCCCAA CGGTTAACTT CCCTAATCCG
GAAGAAAAGG GTGCGATGGA CTTAGTCATT GCCGAAGCGA AAAAGCATGG CGCCATGCTC
GCCTGTGCCA ATGACCCCGA TGCGGACAGA TTTGCGGTTG CAGTTCGTAA GGATGATGGC
GAGTATCAAA TGCTAACGGG TGACCAAGTG GGTGTGCTCT TTGGTCATTA TCTGTTAAGC
CATGCGAGCA AGGAGCAGCG TCTGGTGGGC ACGACTATTG TCTCCTCCAG TCTATTATCT
AAAATCGCTA AAGGCTTTGG CGTTGAAAGC TATACCACGC TCACCGGTTT TAAGTGGCTG
ATGAATGTGG GAATTGCGCA GAGTCAGCCT GATAACCAAT TCCTGTTTGC CTACGAAGAA
GCCCTGGGTT ACACGGTCGG TAACATGGTG TGGGATAAGG ACGGCTTGTC GGCTCTCGTC
GCCTTTGCCC AATTAACCGC CGAGCTTGCC GCTAAAGGGC AAACCATTTG GGATAGACTC
GAGCAGATTT ACCGCGAGCA GGGTTTCCAT CTCAATGCTC AAGTTAGCAT TGCCTTAAAA
CCCGACACGC CTAATATTGG CGCGTATCTG CGTGAACATC CACCGCTGGC AATTGGTGAA
CATGCCTTGG TGTCGACCGA TGATCTCAAG GCATTAGAGC GCCGTTTTGC CGATGGTAAG
GTTGAGAAAA TCAATCTGCC CGCCAGTGAT GTATTAACCT ATCGCTTAGC CAATGGCGCG
CGGGTTATAG TCAGGCCGTC AGGCACTGAG CCTAAAATCA AGTGTTACTA CGAGGTGGTC
GAACCTATGA CGGCGCAAGA CACCTTAGCC AGCGCCCAAG CACGGGCAAC TCTGGCGATG
GAGGCGTTTA TTTCAGCCCA TCAGGCGAGC CTGCCTAAAT AA
|
|---|
| Protein sequence | MNTHLQLQVK HWLENDPDPR TQAQLQALID AGNDAELEAR FAGRLEFGTA GLRGVVGAGP
MGMNRLVIRQ TSAGLGAYLL EQIKDAAERG VVIGYDGRHD SRTFAHDTAS VLTAMGIKVR
LTAKVAPTPL VAFGVKHFNA AAGIVVTASH NPPQYNGYKV YWENGAQIIP PHDSGIAAKI
ELAATQAIPF MDQVEATKQG KLIWLQDDYY ETYRRGVMHA NVLQNNTAPE KVSLAYTAMH
GVGAEMAETV LKDAGFAQVY SVVAQREPDG DFPTVNFPNP EEKGAMDLVI AEAKKHGAML
ACANDPDADR FAVAVRKDDG EYQMLTGDQV GVLFGHYLLS HASKEQRLVG TTIVSSSLLS
KIAKGFGVES YTTLTGFKWL MNVGIAQSQP DNQFLFAYEE ALGYTVGNMV WDKDGLSALV
AFAQLTAELA AKGQTIWDRL EQIYREQGFH LNAQVSIALK PDTPNIGAYL REHPPLAIGE
HALVSTDDLK ALERRFADGK VEKINLPASD VLTYRLANGA RVIVRPSGTE PKIKCYYEVV
EPMTAQDTLA SAQARATLAM EAFISAHQAS LPK
|
|---|
| |