| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2703 |
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| Symbol | |
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| ID | 4479107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3230269 |
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| End bp | 3233124 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639727309 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_870336 |
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| Protein GI | 117921144 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.398074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCT TAACCACCAA GCCTGCCGCG ATTGCCCTAG CTATCGCAGC GGCTCTGACA
GCAACTCACA GCGCTGCCAA TGAAATACCA GCAGAGCAAC AAACCAAAAC GAAAGAGCAA
GTTCAAGCGA AGGATACTGC GCAAGCCCAG GATGCCGAGG TCGAACGCAT TCAGGTAACA
GGGATCAGAA ACAGTATTAA GGAAGGGATG TTCCTAAAGC AGAATGCCGT GAGCGTGGTC
GACCTTGTGG TCGCCGATGA CATTGGTAAA TTTCCAGATG AAAACTTAGC CGAGGCGCTA
CAGCGCATTC CCGGGGTGAC CATTACCCGT AACGGCGGCG AAGGACAAAA TATTCTGGTT
CGTGGCCTTG GCGATGGTTA TAACGTCACC ACTCTTAATG GCCGTAAACT AGCCTCAGAA
AATGCGGGCC GAGACTTTAA CTTCGACACC ATCGCCTCTG AGCTGGTGAA TGTGCTGGCG
GTGTATAAGT CACCCGAAGC CAGACTGACC GAAGGTGGCA TTGGCGCTAT CGTCGATATC
CAAACCCGTA AACCGCTGGA TTTAGAAGGC CGTACCATTC AAGCCTCCGC TAAGGGTATT
TACGAATCCC GTACCGAGGA CATTCATCCC CACGCTTCAC TGATCATTGG TGATAAGACG
GATGACGATA GTTTTGGCGC GCTGGTCTCG GCGGTATATT CCCGTAAAAC CCTGCGGGCA
GATACCTATT CGGCCGAAGG TTTCTTCGAT GAAGATGAAG GCTGGGGCGT CGACAGTGCC
GGGGTGCCAG TCGATACCAA CAATAACGGC GTGATCGACC CAGGTGAGAT TTATGCCTCT
AAGATCCCAA GCTATATGTA TTTTGCAAAC GCCCAAGACG TGCGTGAACG CGTAGGTGGC
ACACTCGCCC TACAATGGCG CCCACTGGAT AATCTCGACA TCAACTTCGA CGGTCTCTAT
TCGCGCTACA ATACCGATGG CCATAAATAC CAAATCGGCT TCGTGAACTA CGACGAAGAA
TGGACGCCGG GCACACCGCT ATTTACCGAC GCCATATTTG ACGATCAGGG TCGTGTGGTG
AGCATGAACC AAACGGGCGA TAACACTATG GTTGAATTGC TCAACCTCAG TACCCCAAGA
AAAACCGATA CCTACCAAAT GGGCCTTAAG GCCGACTGGT ATGTCATGCC CAATTGGTCG
ATTACCGCCG ATGTCGCCTA CTCCGCCGCG CAAAATGCCA ATAATGGCGA TAACCGCTTC
GTGGTGGCCC GTGGCTTTGT CGACGGCATC GACATCGATT ACACCCGTGG CAATATGCTG
CCCGATGTAG TGATAAGCCC AGGCCTGAGC GCCGATCAAA AATACGGCGC CCACTATAGC
CGTAACAGTG GCGTCGATGT GGACGATAAA ATTACCGACA TTAAACTGAT TAGCCAATAC
ATCCCCGATG AAGGCATCAT CAGCAAGGTC GATTTTGGCG TCAATTACGT CAAGCAAGTG
AAAAAGCAGA CCGAATTTGC TTCCGCTAAC TCCAGTCAAT TCAGTCGAGG TGGCTATTAC
CTCACCCGCG ACGGTTATAC CTTCGATAAC AGCACTGTCT TTACCCAGGG TGAATTTGAA
CTGTTCCAAA TTCCTTCGAG CGTATTTGTG CCGGCCAACT TCGATAACTT CCTCGATGGT
GAAAACAGTA TCTCCCCAGA GCCTTGGCCA AGCTTCGACT ACGACAAACT GCTTGAATAC
TACCGCAGCA TTAACCAAGA AGCGGCGGAT AAGAGCATTG TCGCTAGCCT CAATAAGGCG
GGGAGCTATG AAGTCACCGA GGCTGTGACC TCCGCCTATG TGCAGGTGAA TATCGAAGAG
GAAATTTTCG ATCTGCCTTA TATGTTGAAC TTAGGCCTCA GAGCTAGCCA GACCAAAGTC
ACCTCCGACG GTTATGCCTA TGATTTGGCG AAGGTTGAAT TAGACAGTGC CGGCCAACCC
ACCAACAACG ATTGGAAAAA CGTCGTCCAA GCCAGTTACG ACGATAGCTA TACCAATGTG
TTGCCGAGCA TGAACTTTAA GCTCAATCTG CAGGATGACT TGCTGCTTCG TGTCTCCGCC
GCCGAAGTGT TAAGCCGTCC GTCACTGTAT GCACTGCGTG TGTGGGCTGC ACCGAGTTTC
ACGACCCGTG AGAATGGTTT ACCGACACTG ACACGCGGTA ACCCGAGCGT CGCCCCCGAA
AAGGCGCGCC AAGGGGATAT CTCCCTCGAA TGGTATTTCC ACGAGAGTAG CTCACTGAGC
GGTGCCATCT TTATCAAAGA TATTGAATCC TTTATCACCG ACGAAAAAGG GCCTCAAATG
GTTGAAGGGA CTGAATATTA TGTCACTCAA CCCGTATCGG GTAAGTACGG TGCCAAAGTG
CAAGGGGTGG AAGCCGCATG GCAACAATCC CTCGACGAAT ACCTGCCAGA ACCCTTTAAT
GGTCTAGGTT TCCAGCTGAA CTACACCTAT GTGGACAGCA GCTACGATGA TCCCGAAATC
GATGCGAAAG GCTTACCCTT TAAGGGCATG TCGAAAAACT CTTACAACGC CGTCCTTTAC
TATGAGCAAT ACGGCCTGCA GGCTAGGGTT GCCTATAACT GGCGCAGTAA GTTCCTCGTC
GATCCCGAAG CTTGGGGTGG TCCAGCTTGG ATCCAAGACT ACGGCCAGCT CGATGCTAGC
GCGAGTTATG ATATTTTCGA AAATGTGTCG ATTTTCGCCG AGGCTTCTAA CCTGACCAAT
AACCGCTATT CAGGTTATGT GAAGTATGAA GACCAAGTGA ATTACCTTGA GCGTTTTGGC
ACCCAAATCG CCCTCGGGAT CCGCGGCAGT TTCTAA
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| Protein sequence | MKLLTTKPAA IALAIAAALT ATHSAANEIP AEQQTKTKEQ VQAKDTAQAQ DAEVERIQVT
GIRNSIKEGM FLKQNAVSVV DLVVADDIGK FPDENLAEAL QRIPGVTITR NGGEGQNILV
RGLGDGYNVT TLNGRKLASE NAGRDFNFDT IASELVNVLA VYKSPEARLT EGGIGAIVDI
QTRKPLDLEG RTIQASAKGI YESRTEDIHP HASLIIGDKT DDDSFGALVS AVYSRKTLRA
DTYSAEGFFD EDEGWGVDSA GVPVDTNNNG VIDPGEIYAS KIPSYMYFAN AQDVRERVGG
TLALQWRPLD NLDINFDGLY SRYNTDGHKY QIGFVNYDEE WTPGTPLFTD AIFDDQGRVV
SMNQTGDNTM VELLNLSTPR KTDTYQMGLK ADWYVMPNWS ITADVAYSAA QNANNGDNRF
VVARGFVDGI DIDYTRGNML PDVVISPGLS ADQKYGAHYS RNSGVDVDDK ITDIKLISQY
IPDEGIISKV DFGVNYVKQV KKQTEFASAN SSQFSRGGYY LTRDGYTFDN STVFTQGEFE
LFQIPSSVFV PANFDNFLDG ENSISPEPWP SFDYDKLLEY YRSINQEAAD KSIVASLNKA
GSYEVTEAVT SAYVQVNIEE EIFDLPYMLN LGLRASQTKV TSDGYAYDLA KVELDSAGQP
TNNDWKNVVQ ASYDDSYTNV LPSMNFKLNL QDDLLLRVSA AEVLSRPSLY ALRVWAAPSF
TTRENGLPTL TRGNPSVAPE KARQGDISLE WYFHESSSLS GAIFIKDIES FITDEKGPQM
VEGTEYYVTQ PVSGKYGAKV QGVEAAWQQS LDEYLPEPFN GLGFQLNYTY VDSSYDDPEI
DAKGLPFKGM SKNSYNAVLY YEQYGLQARV AYNWRSKFLV DPEAWGGPAW IQDYGQLDAS
ASYDIFENVS IFAEASNLTN NRYSGYVKYE DQVNYLERFG TQIALGIRGS F
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