Gene Shewana3_2693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2693 
Symbol 
ID4478460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3219746 
End bp3220582 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content51% 
IMG OID639727299 
ProductAraC family transcriptional regulator 
Protein accessionYP_870326 
Protein GI117921134 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTG AACATGCGGC CTACCACATC GCCAATGAAC TGGGCGGCCT TGAGCTACTT 
AATGCTCACT ACCATAAGCA AAATTTTAGT CGCCATACCC ACGAAGGTTA CACGGTTGGC
GTGATTGAAA CGGGCGCTCA GCGTTTTTAT CGCACCGGTG GCAACCATGT GGCGCCAAAG
CACAGTATTA TTCTTGTCAA TGCCGACGAA GTACATAATG GCTGTAGCGC CACCGAGGAC
GGCTGGTCCT ATCGAGCCAT GTATCCCGTC CCCGCCCAAT TTGCCAATAT TACCCAAGAG
TTCACTTCAA CTCGCGGCGC GCCCTATTTC CCACAACCCG TAGTGCAGGA TCCCGAGCTT
GCCGAATTGC TGCGCCTCAC CTTTAGCACC TTAGATACCT CGGACAATCG GTTACTGCGT
GAAAGTCTGG TCTATTCGAG CCTGACGCAA CTTATGGCGC GCCATGGCCG AAATTATCCT
TGTGAACACT TGGGGGCAAA CGCTAAACCC GCATTAGCCT TGGTGAAATC CTTTATTGAC
GATCATCCCG CGGCCGATAT CTCCCTCGAA GAGTTGGCCA CACTCGCGGG ATTAAGCCCC
TATTATTTGC TCAGACAGTT TCAACGTTGT TATGGTCTGC CGCCCCACGC CTATCAAACT
CAGGCCAGAG TCAGACTGGC AAAACAGAAA ATCGGCCAAG GGATTAAGCT GCTGGATGTT
GCCATGGAAT GCGGCTTTCA TGATCAAAGT CATTTAAACC GCCATTTTAA AAAGACTGTC
GGACTCACTC CAGGGCAATT TGCCAAGGGG ATTGGCCGCA ATATTATCCA AGCTTAA
 
Protein sequence
MNTEHAAYHI ANELGGLELL NAHYHKQNFS RHTHEGYTVG VIETGAQRFY RTGGNHVAPK 
HSIILVNADE VHNGCSATED GWSYRAMYPV PAQFANITQE FTSTRGAPYF PQPVVQDPEL
AELLRLTFST LDTSDNRLLR ESLVYSSLTQ LMARHGRNYP CEHLGANAKP ALALVKSFID
DHPAADISLE ELATLAGLSP YYLLRQFQRC YGLPPHAYQT QARVRLAKQK IGQGIKLLDV
AMECGFHDQS HLNRHFKKTV GLTPGQFAKG IGRNIIQA