| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2683 |
|---|
| Symbol | |
|---|
| ID | 4478450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 3208133 |
|---|
| End bp | 3209131 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639727289 |
|---|
| Product | catalase domain-containing protein |
|---|
| Protein accession | YP_870316 |
|---|
| Protein GI | 117921124 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0753] Catalase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.240925 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCAT ATCATGCCAA ACTCAGCTCA CTCGCCACCG CTTGCCTAAT GGTCGGCTCA
GTGTTTGTCG CCCCACTTGC CAGTGCGGCG GAGCGTACCA TTCCCGAATT AGTGGATGCA
GTGAACGGCA CGCCAGATGC AGCGAGTCGC GAGGCGGGTA AAAAAGTGAA ACTGCGCAAT
CATACAAAAG GGTTTTGTAC CTCGGGCTAC TTTGCCCCCA ATCCCCAATT ACACGATTCA
CTCAACATTC CCTTTTTTAA TCAAAATCCC ATTAAAGTGA CCGCCCGTTT TTCCCTCGGC
GGCACCAATC CTAAGCTGTC CGATAAGACT CCTGGGCGCT TTATGTCATT GAAAATTGAT
GGAGAGCGGG AAAACCTGAA CTTTGTCACC ACCAATGTGC CAGTCTTCTT TGCCAGTAAC
CTTGAGGATT TTTATCTGTT CCAAACTAAA ACCAAACAAG GCGCCGAAGG TAAGCAATGG
CTTATCGATA ATAAGCCCGA CGCCAAAGCC TTTTTCGACT ATCTAAAACA ATTGCCGCCG
AGCCCGAGTT TTGCCAATAG CCAGTACTTT GGGGTGAACA GTTTTCTGTT TACCGATAAG
CAAAATAACA GCATTGCGGG TAAATGGATT TTTGAACCCG TAGCGGACAC GCAAGCACTC
ACTCCGCAAG CATTGGCACA GCTCGATGAT GACTTTCTCA AGCCCGAGTT ACTCAAGCGA
ATTCAGTCTC AACCCGCCAA GTGGGATCTG TATATTCAGT TAGCGGAACA AGGCGATGAG
ATTAATAACC CGACAGTGCT CTGGCCCGAA GACCGCCAGC GCATTCTCGT CGGCCAAGTG
GTGATTGATG GCAAGCGCGA CAGCGATCCT CAAGTACAAC AATGCGATAG AAGCATTTTT
AACCCTCTGC TGCTCCCCAA AGGCATAGCA GCGTCGGATG ACCCAATTCT CAATGCCCGC
ACCGCGGCAT ATGTGGAGTC CTTTATCCGT CGTCAATAA
|
|---|
| Protein sequence | MQPYHAKLSS LATACLMVGS VFVAPLASAA ERTIPELVDA VNGTPDAASR EAGKKVKLRN
HTKGFCTSGY FAPNPQLHDS LNIPFFNQNP IKVTARFSLG GTNPKLSDKT PGRFMSLKID
GERENLNFVT TNVPVFFASN LEDFYLFQTK TKQGAEGKQW LIDNKPDAKA FFDYLKQLPP
SPSFANSQYF GVNSFLFTDK QNNSIAGKWI FEPVADTQAL TPQALAQLDD DFLKPELLKR
IQSQPAKWDL YIQLAEQGDE INNPTVLWPE DRQRILVGQV VIDGKRDSDP QVQQCDRSIF
NPLLLPKGIA ASDDPILNAR TAAYVESFIR RQ
|
|---|
| |