| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2660 |
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| Symbol | clpX |
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| ID | 4478424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3175465 |
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| End bp | 3176745 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639727263 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_870293 |
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| Protein GI | 117921101 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000197549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.676144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGACA ACAAAAATAA TGGTGACAGC GGTAAATTGC TGTACTGCTC TTTTTGCGGT
AAGAGCCAGC ATGAAGTCAG AAAACTGATT GCAGGCCCAT CAGTATACGT ATGCGACGAA
TGTGTTGAAT TATGCAACGA CATCATTCGT GAAGAGATTA AAGAAATCTC CCCTAAGCGT
GATAATGATA AATTGCCAAC GCCACATGAG TTGCGTGCGC ATTTAGACGA TTATGTGATT
GGTCAAGACA GAGCCAAGAA AGTGCTGTCT GTCGCTGTGT ACAATCACTA TAAGCGCCTG
AGAAATTCTT CTCCTAAAGA TGGTGTGGAA TTAGGTAAGA GTAATATTCT GCTGATTGGT
CCAACGGGCA GTGGTAAGAC GTTGCTGGCC GAAACGCTTG CGCGCTCATT GAATGTCCCA
TTTACTATGG CAGATGCCAC CACCTTAACC GAAGCGGGTT ATGTGGGTGA AGACGTTGAA
AACATCATCC AAAAGCTGCT GCAAAAGTGC GATTACGATG TTGAAAAGGC ACAGCGCGGT
ATCGTCTATA TCGATGAAAT CGACAAGATC AGCCGTAAAT CGGATAACCC ATCGATTACC
CGTGACGTAT CGGGTGAAGG CGTGCAGCAA GCGCTACTGA AACTTATCGA AGGTACGGTT
GCCGCGGTTC CGCCTCAAGG TGGTCGCAAG CATCCACAAC AAGAGTTCTT ACAGGTAGAT
ACCTCTAAGA TCCTGTTTAT CTGTGGTGGT GCATTTGCTG GCCTTGAAAA AGTGATTGAA
CAGCGTGCTC ACGTAGGTTC AGGTATCGGT TTCGGTGCGC AGGTTAAGGG CGAGAAAGAT
AAGGCAACGA TTTCGCAAAC CTTATCTCAA GTCGAACCCG AAGATTTAGT CAAATATGGC
TTGATCCCTG AGTTTATCGG CCGTCTGCCT GTTGTCGCGA CGCTGACCGA GCTGGACGAA
GAAGCCTTAG TGCAAATTCT TTCTGAGCCT AAAAACGCGC TGACAAAACA ATACAACGCG
CTGTTTGAGA TGGAAGGGGT AGAGCTAGAG TTCCGCGAAG ATGCGCTCAA AGCGATTGCA
CATAAAGCCA TGTCACGCAA AACCGGTGCC CGTGGTCTAC GTTCAATCGT TGAAGGTATC
TTACTCGATA CTATGTACGA TATTCCTTCG ATTGAGGGCG TGGTGAAGGC GGTTGTCGAT
GAATCAGTGG TGAATGGTGA GTCTGCACCA ATCCTGATTT ACGAGCGCAA CGAAGCGCAA
GCTGCCTCTG GTGAACAATA A
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| Protein sequence | MGDNKNNGDS GKLLYCSFCG KSQHEVRKLI AGPSVYVCDE CVELCNDIIR EEIKEISPKR
DNDKLPTPHE LRAHLDDYVI GQDRAKKVLS VAVYNHYKRL RNSSPKDGVE LGKSNILLIG
PTGSGKTLLA ETLARSLNVP FTMADATTLT EAGYVGEDVE NIIQKLLQKC DYDVEKAQRG
IVYIDEIDKI SRKSDNPSIT RDVSGEGVQQ ALLKLIEGTV AAVPPQGGRK HPQQEFLQVD
TSKILFICGG AFAGLEKVIE QRAHVGSGIG FGAQVKGEKD KATISQTLSQ VEPEDLVKYG
LIPEFIGRLP VVATLTELDE EALVQILSEP KNALTKQYNA LFEMEGVELE FREDALKAIA
HKAMSRKTGA RGLRSIVEGI LLDTMYDIPS IEGVVKAVVD ESVVNGESAP ILIYERNEAQ
AASGEQ
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