Gene Shewana3_2654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2654 
Symbol 
ID4478418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3167776 
End bp3168561 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content48% 
IMG OID639727257 
ProductABC transporter related 
Protein accessionYP_870287 
Protein GI117921095 
COG category[V] Defense mechanisms 
COG ID[COG4167] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.53593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC CACTGCTTAA AGTTAACGAT CTCTTTAAGA GGTACGATAC CGGCTATAAG 
GGCTTTACCC GCCAATATAA CGATGCCTTA GCCCCGGTTT CCTTTGAATT AAACCGCGGC
GAAACCTTAG CGATTGTGGG TGAAGCGGGT TCAGGTAAGA GTACGTTAGC GCGTATTTTG
GTGGGCGCAG AACCCCGCAG CGGCGGTGAA ATTTACTTTG AGGGCGAGGC GCTTGATAGC
CGCAATATTA AGCAGCGCTG CCGCCTTATT CGGATGATTT TCCAAGATCC CAATACCTCA
CTCAATCCAA GGCTCACCAT TGGCCAATTA CTGGATGAAC CGCTGCGCTT TAACACTGAG
TTATCCGCCA AAGAGCGTAG TGGCCAAGTG ATTGATACCT TGAGGAAAGT TGGTTTATTA
CCCGAACATG CGGATTTTTA TCCCCATATG ATTTCTGAGG GTCAAAAACA GCGGGTTGCG
GTGGCGCGGG CGCTGATGCT CAATCCGAAG ATTATCATCG CCGATGAAGC ATTAACCGCC
TTGGATCTCT CGGTACGCTC ACAGATCCTT AACCTGCTGC TCAAATTGCA GAAGGACTTA
GGCTTGTCCT ATATCTTCGT GTCCCATAAC CTGAATATTA TTCGCCATGT CAGCGATAAA
ATTATGGTGT TACACAAAGG GGTGATGGTT GAGAAAGCCC CAACAGAACA GATATTTAAT
TCGCCTCAGC ACGAATATAC CCAAAGGCTG ATTCAGGAGC AGAGCCTGTT TGTTCATAAG
CGTTAA
 
Protein sequence
MTTPLLKVND LFKRYDTGYK GFTRQYNDAL APVSFELNRG ETLAIVGEAG SGKSTLARIL 
VGAEPRSGGE IYFEGEALDS RNIKQRCRLI RMIFQDPNTS LNPRLTIGQL LDEPLRFNTE
LSAKERSGQV IDTLRKVGLL PEHADFYPHM ISEGQKQRVA VARALMLNPK IIIADEALTA
LDLSVRSQIL NLLLKLQKDL GLSYIFVSHN LNIIRHVSDK IMVLHKGVMV EKAPTEQIFN
SPQHEYTQRL IQEQSLFVHK R