| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2652 |
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| Symbol | |
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| ID | 4478416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3165894 |
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| End bp | 3166784 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639727255 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_870285 |
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| Protein GI | 117921093 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.642753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCCAA TTAAAATTTA TCAGGAAGAT CAAATCGCCT CGCCGATGAT GCGGGTCTGG
CAGAATTTTT CGGCAAACCC CTTTGCCTTA GCGGGTTTGT GGACCATTGC TTTTCTGCTG
CTGCTCACCC TGTTCGGACC TATGATTGCC CCTTTCTCCC CCGAAGCGCA GGATCCTCGC
GCATTACTGT TGCCGCCCTC TTGGGACCCA TCGGGCACAG TGGCGCACTT TTTAGGTACT
GATGATCTGG GTCGTGACAT TTTTAGCCGC TTACTGCATG GGGCGCATTT AACCTTCGGC
ATGGCGCTAA TGATTGTCGG CACCGCGCTG TTTATGGGTT TCATCATAGG CTCGCTTTCG
GGCATGATGC GCGGCTTAAA GTCCAGTATC TTGGGGCACT TACTCGATGC ATTGCTGTCG
ATTCCTTCAC TATTAATGGC GATTTTAGTG GTTGCAGTGA TGGGGCCAGG GCTTGAAAAC
GTCTTCTGGG CCGTGGGCAT TGCCTTAACA CCGCAGTTTG TGCGCTCCAT TCATCAATCG
GTGCATGAAG AGTTACAGAA AGAATACGTA ACTGCCGCCC GTTTAGACGG CGCCAATTCG
CTGCAGATTT TTTGGTATGT GATCATGCCA AACGTGTGGG AAGTAGTGAT TATTCAAACC
ACCTTAGCCA TTTCTGCCGC GATTTTAGAT ATTGCCGCCC TTGGCTTTTT AAGCCTTGGC
GCCCAAGCTC CCAGCCCTGA ATGGGGTGCA ATGGTCGCCC AAGGCATGGA TAATTTGTTG
ACCGCACCTT GGACTGTGAC CATTCCAGGG CTGGCGATTC TTTTTAGTGT GCTCGCCATT
AACTTGGTGG GCGATGGCTT GAGATCGGCG CTTGCGCCCA TCAGAAACTA A
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| Protein sequence | MPPIKIYQED QIASPMMRVW QNFSANPFAL AGLWTIAFLL LLTLFGPMIA PFSPEAQDPR
ALLLPPSWDP SGTVAHFLGT DDLGRDIFSR LLHGAHLTFG MALMIVGTAL FMGFIIGSLS
GMMRGLKSSI LGHLLDALLS IPSLLMAILV VAVMGPGLEN VFWAVGIALT PQFVRSIHQS
VHEELQKEYV TAARLDGANS LQIFWYVIMP NVWEVVIIQT TLAISAAILD IAALGFLSLG
AQAPSPEWGA MVAQGMDNLL TAPWTVTIPG LAILFSVLAI NLVGDGLRSA LAPIRN
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