| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2648 |
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| Symbol | |
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| ID | 4478412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3161232 |
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| End bp | 3161915 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639727251 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_870281 |
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| Protein GI | 117921089 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.511063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAATTT TCTCTCGTTT CGCCGATATC ATTAACTCCA ATATCAGCGC ATTACTCGAT
AAAGCAGAAG ACCCTGAAAA AATGGTTCGT CTGATTATCC AAGAGATGGA AGATACACTG
GTAGAAGTTC GTTCAACATC AGCAAAAGTG TTAGCTGAAA AGAAAGAATT AATCCGTCGT
ATCAGCCGTG TTGAAGAACA AGTTCAAGAT TGGCAAGACA AAGCTGAGCT GGCACTGTCG
AAGGATCGCG AAGATTTAGC CAAGGCCGCT TTAGTTGAAA AACAAAAAGC CGCGGGTTTA
GTGGATACCT TAAACCAAGA GTTGGCAGTG ATCGACGAGC ACATTGTGCG CTTAAAGGAT
GAAGTTAGCC TGCTGCAAGA AAAGTTACTG GATGCTAAGG CGCGCCAAAA GACCATTATT
TTGCGTAAAC AAACCGCCTC ATCACGTTTA GAAGTGAAGA AGCAGTTAGA CTCAAGCAAA
ATCGACAACG CTATGCTGAA ATTTGAGCAA TATGAGCGCC GTGTCGAAGG GTTAGAAGCG
CAGGTTGAAT CCTACGATCT GGGTAATAAA AAGACCTTAG CCGATGAGTT TGCTGCACTG
GAAGCTGAAG ATTCAGTGAA TGCCGAGCTG GAAGCATTAA AGGCCAAAGT AAAAGGCAAA
GCTGCGACTA AGTCAAAAGA ATAA
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| Protein sequence | MGIFSRFADI INSNISALLD KAEDPEKMVR LIIQEMEDTL VEVRSTSAKV LAEKKELIRR
ISRVEEQVQD WQDKAELALS KDREDLAKAA LVEKQKAAGL VDTLNQELAV IDEHIVRLKD
EVSLLQEKLL DAKARQKTII LRKQTASSRL EVKKQLDSSK IDNAMLKFEQ YERRVEGLEA
QVESYDLGNK KTLADEFAAL EAEDSVNAEL EALKAKVKGK AATKSKE
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