| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2643 |
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| Symbol | |
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| ID | 4478407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3156336 |
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| End bp | 3157529 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639727246 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_870276 |
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| Protein GI | 117921084 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01328] methionine gamma-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.215798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGATG AATCAAGCAA GCAGTGGAAA GCCGCGACCC AAGCTATTCA TGCCGGGCAT
GAGCGAGAAG CTTTTGGTAC TTTGGTGACG CCACTTTATC AAACGGCGAC TTTTGTTTTT
GAGTCGGCGC AGCAAGGCGG CGAGCGATTT GCCGGCAACG AACCCGGTTA TATTTATACT
CGCCTAGGTA ACCCGACCGT TGCCGAGCTG GAACGTAAAA TGGCGATTTT AGAAGGCGCT
GAAGCGGCGG CAGCAACGGC CTCTGGCATG GGTGCTGTGT CGGCGGCGCT GCTGGCTAAC
TTGCAGATGG GCGATCATTT AGTGGCTTCC AATGCGGTTT ATGGTTGCAC CTTTGCCCTT
ATGACTAGCC AATTTGCCCG CTTCGGTATC GAAGTCACCT TAGTCGATTT TACCGATTTA
GCGGCCATTG AACGGGCTAT CAAACCCAAC ACTCGGGTGA TTTTTTGCGA AACTCCGGTT
AATCCTCATT TACAGGTGTT TGATCTCAAA GGTATCGCCG ATATTGCGAA ACGGCATCAA
CTTGTCAGCA TTGTCGATAA TACTTTTATG ACACCGTTAC TGCAGCAACC CTTAGCATTC
GGTATCGATT TAGTGGTACA CAGTGCGACT AAGTATTTGA ATGGGCACGG CGATGTAATT
GCTGGCGTCG TGTGTGGCAG TGAAGAGCAG CTGCACAGAG TGAAATATGA GATTCTAAAG
GATATCGGTG CTGTGATGTC TCCCCACGAT GCGTGGCTGA TTTTGCGAGG GCTAAAAACC
TTAGATGTGC GTTTGCAGCG CCATTGTGAC AGTGCGCAGC GTGTCGCCGA GTTTTTGGAG
CAACATCCCG CAGTGACTCG GGTGTATTAT CCCGGGCTTA AATCCCATTC AGGGCATCGA
TTTATCGGTG GACAGATGGC GAAAGCTGGT GGCGTGATTG CCTTTGAGTT AGCCGCCTCT
CTTGAGCAAG CGATGGCTTT TGTGGGTTAC CTTAAGCTGT TTTCAATCGC TGTAAGTTTG
GGGGATGCGG AATCCCTTAT TCAGCACCCA GCTTCCATGA CCCACTCACC CTACACGCCA
GAGGCACGCC AGGCAGCGGG AATAAGCGAT AATTTACTGC GCATCTCAAT CGGTTTAGAG
GATTGCGGCG ATATCATCGA GGATTTAAAC CAAGCTTTGG CGATGCTGGC GTAA
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| Protein sequence | MQDESSKQWK AATQAIHAGH EREAFGTLVT PLYQTATFVF ESAQQGGERF AGNEPGYIYT
RLGNPTVAEL ERKMAILEGA EAAAATASGM GAVSAALLAN LQMGDHLVAS NAVYGCTFAL
MTSQFARFGI EVTLVDFTDL AAIERAIKPN TRVIFCETPV NPHLQVFDLK GIADIAKRHQ
LVSIVDNTFM TPLLQQPLAF GIDLVVHSAT KYLNGHGDVI AGVVCGSEEQ LHRVKYEILK
DIGAVMSPHD AWLILRGLKT LDVRLQRHCD SAQRVAEFLE QHPAVTRVYY PGLKSHSGHR
FIGGQMAKAG GVIAFELAAS LEQAMAFVGY LKLFSIAVSL GDAESLIQHP ASMTHSPYTP
EARQAAGISD NLLRISIGLE DCGDIIEDLN QALAMLA
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