| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2642 |
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| Symbol | |
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| ID | 4478406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3155765 |
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| End bp | 3156130 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639727245 |
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| Product | helix-hairpin-helix repeat-containing competence protein ComEA |
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| Protein accession | YP_870275 |
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| Protein GI | 117921083 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.377933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATAA CACATCGTTT ACCCGCGATG GTGAGTGCCA TTGCATTTTC CTGCCTATTC
GCTTTACCTG CGATGGCGGC GGATCCAGCA AAAGATGTTA GCAAAGTGCA AGCGCAAGCT
CAGACAGAGG TTAAAAAGGC AACTACCGAT GCTAAGCAAG CCATGCCTGA TTCGGCTCAG
GTGAATATTA ATACCGCTTC ATCGGAACAG TTGCAGCTGC TTAAGGGCAT TGGGGCGGCT
AAGGCGCAGG CCATCATCGA TTATCGAACG CAAAATGGTA AATTTAAGGC CATTGATGAG
CTAGCGAATG TCTCTGGCAT TGGCGCTAAG CTGATTGAGC AAAATCGTCA TATGATAAAG
CTCTAG
|
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| Protein sequence | MKITHRLPAM VSAIAFSCLF ALPAMAADPA KDVSKVQAQA QTEVKKATTD AKQAMPDSAQ
VNINTASSEQ LQLLKGIGAA KAQAIIDYRT QNGKFKAIDE LANVSGIGAK LIEQNRHMIK
L
|
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