Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2641 |
Symbol | |
ID | 4478404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3154100 |
End bp | 3155380 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639727244 |
Product | phage integrase family protein |
Protein accession | YP_870274 |
Protein GI | 117921082 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.466932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTACACT TGGTGGTACA TTTCATGGGA AGTCATCTCG ATAAATCTCC AGCTTATTTG TTCAAGTCAC GACATGGCAT TTGGTACGCA AGAATAGTTA TTCCCGAAGC AATGCAGTCC ACTCTTGGTA AGCGCGAACT TAGAAAGTCT TTAGAGACTA GAGAGCGCTT TGAAGCCGTG AGAAAGTCTT GGCAAGTTCT AATGCAGTTA AAAAGCATTA TTGAGGGACA CGTTCAGAAT GATTCTGAAT TTTCTCAAGT AGTTGCAATT ACAAGCGCAG TTCACCAAGT TGCACCGATG GCGGCAGCAA TCACCTCAAG TCCAATTCAA AGCCCAAAAC CTAAACTTCC CAAATTGAGC CAAGTATCTG AAGAGTTCTG TCAGGAAAAG CTTAAGCAAG GTGCTTGGTC AGCGGGTAGT GAGAAAGTTA ACCGTCAATC ATTTAAAGAC TTAATAAACC TCATTGGTGA TTTGCATCTG GATGAGTTCA CATTGCCCAA AGCTTTGGAG TATAAGCGGC ATTTCTCTTC AAAGTCTGAG TTGTCAGTTG CTACGGTAAA CAAGCGACTA ACCAGAGTGT CAGCACTCAT GCAATGGGCT TCAATTCATT ACGGTACAAA TAATCCGATG ACAGGATTGA GCATAAAGGT CTCTGAAAGG GTGAAAGCTT CAAAGGCTAG GGATGCTCTG AGTGATAACC AAATCAAGCA GTTATTTAGA GAAATTCCTC CTGTTACCGA AATCAATTTA CCTTATAGAG CTTGGCTGCC TAGATTGGCT GCATACACAG GGGCGAGGAT AGGGGAGCTG GCTCAGCTCT ACTTGGATGA CCTTCAAGTG GTTGATAATC ATCCTTGCAT ACTCATCAGG GCAACCCACA AAGACCAATC TATAAAGACT GCTTCAAGTG AGCGCGTTAT CCCAATTCAC CCTGAGTTAA TAGCTATGGG CTTCCTGAAG TTTGTTGAAA AACAGCAGGA AAAGGGGGGT GAGCGCCTGT TCCCAGAGCT GAGGAAATTG CCAGCTAGAG GCTATTCACA TCAAGTCTCA AAGTGGTTTA GTACCTTCAA GGCCAAGTTG GGCTGGGGTG AAAGGGAGAC TTTGCACGGT ATTAGGCATG CGGTAGCTAC CCAGCTAAAG CATAAGGAGT TTAGCTCGGA CATGGTTGCA GGATTGCTTG GACATTCTCA TGGCTCAATC ACCTTCGACA GGTACGGTAA GGATTATAAG ATTGAAAATA TGCTTAAACT TATTAACGCC TTGGGTTGGT GCCAGAAATG A
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Protein sequence | MVHLVVHFMG SHLDKSPAYL FKSRHGIWYA RIVIPEAMQS TLGKRELRKS LETRERFEAV RKSWQVLMQL KSIIEGHVQN DSEFSQVVAI TSAVHQVAPM AAAITSSPIQ SPKPKLPKLS QVSEEFCQEK LKQGAWSAGS EKVNRQSFKD LINLIGDLHL DEFTLPKALE YKRHFSSKSE LSVATVNKRL TRVSALMQWA SIHYGTNNPM TGLSIKVSER VKASKARDAL SDNQIKQLFR EIPPVTEINL PYRAWLPRLA AYTGARIGEL AQLYLDDLQV VDNHPCILIR ATHKDQSIKT ASSERVIPIH PELIAMGFLK FVEKQQEKGG ERLFPELRKL PARGYSHQVS KWFSTFKAKL GWGERETLHG IRHAVATQLK HKEFSSDMVA GLLGHSHGSI TFDRYGKDYK IENMLKLINA LGWCQK
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