Gene Shewana3_2624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2624 
Symbol 
ID4478492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3128529 
End bp3129056 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content46% 
IMG OID639727227 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_870257 
Protein GI117921065 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00200443 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000116003 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGATTC ACCTGATGGA CATATGGGAT TCCGTCAGGG GCTTCATGGC CTCCGGAGGC 
GACGTCCTCT GGTTAGTAGC GTTTGTGCTG TTCTTAATGT GGGTATTGAT GCTTGAGCGT
TACTGGTATC TTAATTGGAT ATCACCAAAG CAACATAAAG CAATCATAGC TGCATGGGAT
GCTAGAGAGG AAACTACCTC TTGGTATGCA CACCGTATCC GTGAAGCTTG GCTGTCCCAA
GCGAAGCAAG ATTTGAATGC ACGTATGCTG GTCATTAAAA CCTTAGTAGC GATTTGTCCT
ATGATAGGTT TGTTAGGTAC TGTTACCGGT ATGATTTCAG TGTTCGATGT GATGGCAGTT
CAGGGGACGA GTAATGCTCG TTTAATGGCG GCTGGTATTT CAATGGCAAC AATGCCCACT
ATGGCGGGGA TGGTTGCAGC ATTATCGGGA GTATTCTTCA GTACTCGCCT TGATGCCAAA
ATGAAAATCA GCTTAGAAAA GCTAAAAGAC AGCATGCCGC ACCACTAG
 
Protein sequence
MMIHLMDIWD SVRGFMASGG DVLWLVAFVL FLMWVLMLER YWYLNWISPK QHKAIIAAWD 
AREETTSWYA HRIREAWLSQ AKQDLNARML VIKTLVAICP MIGLLGTVTG MISVFDVMAV
QGTSNARLMA AGISMATMPT MAGMVAALSG VFFSTRLDAK MKISLEKLKD SMPHH