Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2624 |
Symbol | |
ID | 4478492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3128529 |
End bp | 3129056 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639727227 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_870257 |
Protein GI | 117921065 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00200443 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000116003 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGATTC ACCTGATGGA CATATGGGAT TCCGTCAGGG GCTTCATGGC CTCCGGAGGC GACGTCCTCT GGTTAGTAGC GTTTGTGCTG TTCTTAATGT GGGTATTGAT GCTTGAGCGT TACTGGTATC TTAATTGGAT ATCACCAAAG CAACATAAAG CAATCATAGC TGCATGGGAT GCTAGAGAGG AAACTACCTC TTGGTATGCA CACCGTATCC GTGAAGCTTG GCTGTCCCAA GCGAAGCAAG ATTTGAATGC ACGTATGCTG GTCATTAAAA CCTTAGTAGC GATTTGTCCT ATGATAGGTT TGTTAGGTAC TGTTACCGGT ATGATTTCAG TGTTCGATGT GATGGCAGTT CAGGGGACGA GTAATGCTCG TTTAATGGCG GCTGGTATTT CAATGGCAAC AATGCCCACT ATGGCGGGGA TGGTTGCAGC ATTATCGGGA GTATTCTTCA GTACTCGCCT TGATGCCAAA ATGAAAATCA GCTTAGAAAA GCTAAAAGAC AGCATGCCGC ACCACTAG
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Protein sequence | MMIHLMDIWD SVRGFMASGG DVLWLVAFVL FLMWVLMLER YWYLNWISPK QHKAIIAAWD AREETTSWYA HRIREAWLSQ AKQDLNARML VIKTLVAICP MIGLLGTVTG MISVFDVMAV QGTSNARLMA AGISMATMPT MAGMVAALSG VFFSTRLDAK MKISLEKLKD SMPHH
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