Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2623 |
Symbol | |
ID | 4478491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3128111 |
End bp | 3128515 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639727226 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_870256 |
Protein GI | 117921064 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00138445 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000106541 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACGTA AAAAGCATTC CAGTGTAGAC GAGGAAGCGC AAATTGATAT GACACCGATG CTCGACATCG TGTTCATCAT GCTGATCTTC TTCATTGTAA CAACGTCATT CGTGAAACCA TCTGGTTTGG ACTATAACAA ACCAAAAGCT TCACAAGCGA CTTCTAAGCC TTCGGCCAAC ATCTTTATCG GCGTCAGCAA AACTGGCGTG ATCATGATGG AAAACCGTCA GGTTGATATC GAGCGTGTAA CTGCAAACGT TGAGCGTATG CTAGCTGAAG CGCCTGAAGC AGCTGTGCTT ATCCAGGCCG ACAAAGATAC GCAACACGGC TTAGTTGTTA AAGTTCTAGA CCAAGTCAAA GCGGCTGGTA TAGATAAGAT TTCGGTATCT GCGGGGAACG ATTAA
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Protein sequence | MARKKHSSVD EEAQIDMTPM LDIVFIMLIF FIVTTSFVKP SGLDYNKPKA SQATSKPSAN IFIGVSKTGV IMMENRQVDI ERVTANVERM LAEAPEAAVL IQADKDTQHG LVVKVLDQVK AAGIDKISVS AGND
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