| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2621 |
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| Symbol | |
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| ID | 4478489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3126236 |
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| End bp | 3127483 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639727224 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_870254 |
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| Protein GI | 117921062 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.669911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000025253 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTAATG CAAATAAAAT CGCAGTTGCG TTATTACTGT CTCTTTGTGG TGGCGCCTTA
TCTGTTTCTT CAGCTGTTGC AGCTGAGAAA TGTGAAATCG ATAAGCGCCA ATCTAAAGCG
GTAGGTGAAA GTGCTGCGAA GAAGGTTCAG AAATCCTTTG AAGCTTACAC CAATGGCCAG
CTTGATGAAG CGATTGCCGT ATTGTTGGAA GCCAACCCAA AGAACGATTT CGATAAAGCG
TATGTTGCGC GTATGCTCGG TAACTTCTAT GCCGAAAAAG GCAAGATGGA TACTGCGATC
AAGTACCTGA AACAAGCCGT TGAAGCGGAT ATTTTAGGTG GAACAGATCA CGCGGCAACA
CTGCGCCTCT ATGCCGACTT GTTGTTACAA GAGAAGAAGT TTAAGGAAGC GATTCCTTAC
TATTACAAGT GGATGGACTT CACTTGTAAG GCTGACTCTC AAATGTATCG TCGTATCGGT
ATTGCTTACA CAGAACTGAA ACAGTGGGAC AAAGTGATTG AAGTGGCTGA TAAAGGTCTT
TCACTCGCCG AAGCTCCTGA TAAAGGTCTG TATCAGATGA AACTGACGTC TTACTTCAAC
CAGAAGAAGT ATAAAAAAGC CGTTGGTGTG TTAGAAGTCA TGGTGCCGTT ATTCCCGGAT
GATGGCAGAT TATGGGTTCA GTTAGCACAG TTTTATCTGA TGGTAGAAGA CTATGATAAG
TCGCTAGCGA CTTATGATTT GGCTTACCGT AATGGTTTCT TGGATTCTGG AGCTAACATC
ACTCGTTTAG CTCAGCTGAT GGCACAGAAA GGTGCGCCAT ATCAAGCAGC TAAAGTATTC
CAAAAGAACA TGAAGTCGGG CCTCATCACT GAAGATGCAA AATCTTATGA GATTTTGGCT
GGTTTCTACC AAAACGCGAA AGAGTTCAAA GAAGCTGCTG AGTTTTATGG AAAAGCGGCT
GCTATCAATA ACGATGGCAA GCTGTACCTG AAACAAGGTC GTTTACTGAG CTTGAATGAG
AAATACTCTG AAGCGATTCC AGTGCTTGAG AAAGCCATCT CTTTAGGTAT TGAACATCCT
GGTGAAGCAA ACTTCGAATT GGCGCTAGCC CATTTAAGTT TGAAACAGTA CAAGTCAGCT
TATAACCGCG CTGTACTAGC CGCGAAGGAT AAGAAGACTG AGAAGAGTGC AAACAGCTAT
ATCGCTTATA TCAAAGAAAA AGCGCGTATG CACAACGTCG AACTGTAA
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| Protein sequence | MRNANKIAVA LLLSLCGGAL SVSSAVAAEK CEIDKRQSKA VGESAAKKVQ KSFEAYTNGQ
LDEAIAVLLE ANPKNDFDKA YVARMLGNFY AEKGKMDTAI KYLKQAVEAD ILGGTDHAAT
LRLYADLLLQ EKKFKEAIPY YYKWMDFTCK ADSQMYRRIG IAYTELKQWD KVIEVADKGL
SLAEAPDKGL YQMKLTSYFN QKKYKKAVGV LEVMVPLFPD DGRLWVQLAQ FYLMVEDYDK
SLATYDLAYR NGFLDSGANI TRLAQLMAQK GAPYQAAKVF QKNMKSGLIT EDAKSYEILA
GFYQNAKEFK EAAEFYGKAA AINNDGKLYL KQGRLLSLNE KYSEAIPVLE KAISLGIEHP
GEANFELALA HLSLKQYKSA YNRAVLAAKD KKTEKSANSY IAYIKEKARM HNVEL
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