Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2619 |
Symbol | |
ID | 4478487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3123759 |
End bp | 3125594 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639727222 |
Product | hypothetical protein |
Protein accession | YP_870252 |
Protein GI | 117921060 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000485801 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAATTAA GTTTATTAGC GGGAACGATA GCGTTAGTGT TTGCTTTACA AGGCTGCTCA AAGCCTGAGA CAACGGCTGC GGTACAGGAA GGTTCGGCTC CATCAGCACC CGCCCAAGCT CAAACTGAAA CTCAAACCGC AGAGTCTAAA TACGCAGCCT TAGTTGATGC CTATTTTAAA GATTACTTAA AGTTAGAGCC GATTTACGCC ACTTTTGTCG GTGTTAATGA TTACAACGCG CAGTTTGGTG GAGACTTAAC CGAGGAATAT CTTAAGGCGC GTCATGATCT TAATACCCGT TATTTAGCGC AAGTGAGAGC GATTGACCTT GAGCAATTGC CAGCCGATTT ACAACTCAGC TATGCGCTGT TTGTTTATGA CCGCGAAATG GCTCTAGTGG ACGAAACCTT CCCATCACGC TTTATGCCGA TCAGCCAATT CTACAGCACA GTGATCACTA TGGTGCAACT GGGGAGCGGT GAGAGTGCGC AGCCCTTTAA CACAGTACAG GATTATCGCA ACTGGGAGCA GCGTGTTAAC GGCTTTATCG ATTGGATCCA ATTGGCCGAG AATCGCATGA ATGAAGGTAT TGCCAGTAAA GTGGTGTTAC CGCGCGTGTT AGTTGAGCGG ATTATTCCAC AGCTTGATGC CATGCTTACT ACGGATGCTA GCCAAAGCAT TTTCTATTCA CCGATTAATC ACTTCCCAGA AGCGTTTTCG GATCAAGATA AGGCTGAGTT AACAGCAAGT TATCAGGCGA TGATTAATGA GCGTTTAGTG CCTGCATTAA CGGGGCTGCG CGATTACTTC AAGCAGACTT ACTTACCTAA GTCCCGCGCG ACGGACGGTT GGTCTGGTCT ACCAAACGGT AAAGCTTGGT ATCAGCATTT AGCCAATTCC CATACCACCA CGACCATGCC GGTGGATGAA ATTCATCAAA TCGGTCTGAA TGAGGTCGCG CGCATTCTTT CTGAGATGGA CAAAGTCCGT GAGCAAGTGG GTTTTAAAGG GGATTTAAAA GCCTTTTTCG CCTCCTTATC GTCTGAACCA CAATACTTCT ATAACGATCG CCAAGGCCTA ATCGATGGCT ACATGGTGTT AAAAGATAAG ATTAACCAAG TATTGCCACA GTATTTTAAT GTGATGCCAA AGGCCGACTA TGTGGTTAAA CCGGTTGAAA GCTTTAGAGA ACAATCGGCA GCGGGCGCAT CCTATGAATC GCCGGCTGTG GATGGTAGTC GTCCAGGGGT GTTTTATATC AACACCTATA ACCTAAAAGC TCAGCCGAAA TGGGGCATGA CGACGTTATC ATTACATGAG GCCGCGCCTG GGCACCATTT CCAAATCGCC ATTAAGCAAG AGCTAACAGG CGTGCCTGAG TTCCAACGTT TCAGTGGCTA TACAGCCTTC GAAGAGGGCT GGGCGTTGTA TGCTGAATAC TTAGGCATCG AAATGGGGCT CTTTAGCGAC CCTTATCAAT ACTTTGGTAA GCTGTCAGAC GAAATGCTGC GTGCGATGCG TTTGGTGGTG GATACGGGAT TACATGCCAA AGGCTGGAGC CGCGAGCAAG CGATTCAATA TATGAAGGAC AATTCGCCCA TGGCCGAGTC GGATATTATT GCTGAAGTTG AACGTTATAT GGCGATTCCG GGTCAAGCGC TCTCCTATAA AGTAGGTCAG CTAAAAATCC TAGCCCTACG TGAACGTGCT GAAAAAGCCC TAGGTGATAA GTTTGACCTA AAAGCCTTCC ATGATCAGAT CCTCACCTCT GGCTCACTAC CTATGGCGGT GATGGAGCAG AAGATCGACC GCTGGATTGC GGCGACTAAG GCTTAA
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Protein sequence | MKLSLLAGTI ALVFALQGCS KPETTAAVQE GSAPSAPAQA QTETQTAESK YAALVDAYFK DYLKLEPIYA TFVGVNDYNA QFGGDLTEEY LKARHDLNTR YLAQVRAIDL EQLPADLQLS YALFVYDREM ALVDETFPSR FMPISQFYST VITMVQLGSG ESAQPFNTVQ DYRNWEQRVN GFIDWIQLAE NRMNEGIASK VVLPRVLVER IIPQLDAMLT TDASQSIFYS PINHFPEAFS DQDKAELTAS YQAMINERLV PALTGLRDYF KQTYLPKSRA TDGWSGLPNG KAWYQHLANS HTTTTMPVDE IHQIGLNEVA RILSEMDKVR EQVGFKGDLK AFFASLSSEP QYFYNDRQGL IDGYMVLKDK INQVLPQYFN VMPKADYVVK PVESFREQSA AGASYESPAV DGSRPGVFYI NTYNLKAQPK WGMTTLSLHE AAPGHHFQIA IKQELTGVPE FQRFSGYTAF EEGWALYAEY LGIEMGLFSD PYQYFGKLSD EMLRAMRLVV DTGLHAKGWS REQAIQYMKD NSPMAESDII AEVERYMAIP GQALSYKVGQ LKILALRERA EKALGDKFDL KAFHDQILTS GSLPMAVMEQ KIDRWIAATK A
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