| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2617 |
|---|
| Symbol | |
|---|
| ID | 4478485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 3122690 |
|---|
| End bp | 3123226 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639727220 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_870250 |
|---|
| Protein GI | 117921058 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000000214426 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAAC TCTATACCGA CAGATTAAGA CTTCGCAGTT TACAAGAGCA GGATTGGCCA
CACTTCTTGG CATTACATCA AGATCCTGAC ATCAATCGCT ATGTGCGCAT TCCTGAAGCT
CCCGAAGTGA TCCGGCAAAA GTTTGAACAG CGCTCAGCCA CCTGGGACTA TGCCTCTGGC
GATTGGCTTA CACTGGTGAT TGAAACCCTT GATAGCGGTG AGTTTATTGG TTTAACCGGT
CTTCATTGTC AAAGTGTGGA GGAGCAACGT GCCGAGGTCG GCTATTTGCT GGCGCACGCG
GGGCACGGTA AAGGCTATGC CACTGAGAGT TTACAGGCGG TTGTCGATTG GGCCTGTTTG
AGTTTGTCTG TTCATAAATT GGTTGGGCAC TGCGCCAAAG ACAACATCGG CTCTGCCCGG
GTGATGGAGA AATGTGGCTT TCAACTCGAA GGCGTATTTC GGCAGCATTT TAAGATAGGT
GATGAGTGGC AGGATGAATG TGCCTATGGG CTGCTCGCCG ATGAAAGGCA AAGATAA
|
|---|
| Protein sequence | MLELYTDRLR LRSLQEQDWP HFLALHQDPD INRYVRIPEA PEVIRQKFEQ RSATWDYASG
DWLTLVIETL DSGEFIGLTG LHCQSVEEQR AEVGYLLAHA GHGKGYATES LQAVVDWACL
SLSVHKLVGH CAKDNIGSAR VMEKCGFQLE GVFRQHFKIG DEWQDECAYG LLADERQR
|
|---|
| |