| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2606 |
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| Symbol | |
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| ID | 4478474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3110619 |
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| End bp | 3111968 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639727209 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_870239 |
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| Protein GI | 117921047 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.581519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000487661 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCAGTTTA CTGATTTTTC TCTGGACCAG CGTCTGTTAC AAAGCTTAAA GCATATGGGG
ATTGCGACCC CAACCGCCAT CCAGGAACAA GCACTGCCTA TCGCATTGGC AGGTAAAGAT
TTAATGGCGT CATCAAAAAC AGGATCGGGT AAGACCTTAG CGTTTTTGTT GCCAGCGATG
CAAAGGGTTA TCTCCACCCG CGCCTTAACC AAGCGCGATC CTAGAGTACT GATTTTATTA
CCAACCCGCG AATTGGCCCA CCAAGTGTAT AGCCAGCTAC GTTTGCTAGT TGCCAACACT
CAGTACAAAG CCATTAGCGT GTTGGGCGGT GAGAACTTTA ACGATCAAGC CAAGGCGCTG
GCAAAAGAGC CGCATTTTAT CGTGGCAACG CCGGGACGTA TCGCCGATCA TTTAGAGCAA
AAAAACCTCT TCCTCAATGG ATTAGAACTG CTTGTCCTCG ATGAAGCCGA CCGTATGCTG
GATCTGGGTT TTGCGCCGCA ATTAAAAGCC ATTAACGCCG CTGCAGATCA TAAGCGCCGT
CAAACCTTAA TGTTTTCGGC CACCTTAGAT CACAGTGAAA TCAATGAGAT TGCCGCCGCA
TTACTCAAAA ATCCATCACA TGTGGCGATT GGCGCTGCCC ACACTGAGCA TCAGGACATT
ACCCAACGGA TTTATCTGTG TGATCATTTA GATCACAAAG AAGCCCTGCT CACGCGTTTG
CTCAGTGACG AAACCCACAA GCAAGTGATT ATTTTTACCG CCACCCGCGC CGATACCGAG
CGCTTAGCCA GCAAACTCTC GGCGCAAGGT TTTGCCACCG CGGCGTTAAG CGGCGAGCTG
AAGCAGGCGG CCCGTAATCA AATCATGGAT CAATTTGCCC GCGGTCAGCA GCAGATTCTG
GTGACCACAG ATGTGGCATC CCGTGGCTTA GACTTACTCA ATGTCTCCCT CGTCATTAAC
TTCGACATGC CCAAATTTGC CGAAGAATAT GTCCACCGTA TCGGTCGTAC CGGCCGCGCG
GGCGCAAAAG GTGATGCAAT CTCCCTCGTT GGCCCTAAGG ATTGGGATAA CTTTAAGAAA
GTACAACTCT TCCTCAGAAA GACCTTTGAG ATCAGTGTCA TTCAGGGCCT CGAAGCTAAA
TTTAGTGGAT TAAAAGACAA GCCAAAGACT GCCGCAACTA AAGCGGTCAC TAAGGCTGGT
ACAAAAACCA AAGCGAAAAC CAAATCAAAA ACGGTTAAAA CGGCCGCCTC CCGTGACAAA
CGCTTTATCA CTGGGGTTGA TGTGGGTGAT GCGCCCATGC GTAAAAAACC TGCGGCGCCT
CTGCTGCAGG ATCATGACGA CGAGCGTTAA
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| Protein sequence | MQFTDFSLDQ RLLQSLKHMG IATPTAIQEQ ALPIALAGKD LMASSKTGSG KTLAFLLPAM
QRVISTRALT KRDPRVLILL PTRELAHQVY SQLRLLVANT QYKAISVLGG ENFNDQAKAL
AKEPHFIVAT PGRIADHLEQ KNLFLNGLEL LVLDEADRML DLGFAPQLKA INAAADHKRR
QTLMFSATLD HSEINEIAAA LLKNPSHVAI GAAHTEHQDI TQRIYLCDHL DHKEALLTRL
LSDETHKQVI IFTATRADTE RLASKLSAQG FATAALSGEL KQAARNQIMD QFARGQQQIL
VTTDVASRGL DLLNVSLVIN FDMPKFAEEY VHRIGRTGRA GAKGDAISLV GPKDWDNFKK
VQLFLRKTFE ISVIQGLEAK FSGLKDKPKT AATKAVTKAG TKTKAKTKSK TVKTAASRDK
RFITGVDVGD APMRKKPAAP LLQDHDDER
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