Gene Shewana3_2569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2569 
Symbol 
ID4479231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3073707 
End bp3073916 
Gene Length210 bp 
Protein Length69 aa 
Translation table11 
GC content43% 
IMG OID639727172 
Productcold-shock DNA-binding protein family protein 
Protein accessionYP_870202 
Protein GI117921010 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.608616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.369821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAG TTACTGGTGT TGTTAAGTGG TTCAACTCTG ACAAAGGTTT CGGCTTCATC 
GAGCAAGAAT CTGGTCCAGA CGTATTCGTA CACTTCCGTG CAATCAACTC TGACGGTTTC
AAAACTCTTG ACGAAGGTCA AAAAGTGTCT TTCACTGTGA CTCAAGGTCA AAAAGGTCCT
CAAGCTGAAA ACGTAACCGT AATCGGTTAA
 
Protein sequence
MSQVTGVVKW FNSDKGFGFI EQESGPDVFV HFRAINSDGF KTLDEGQKVS FTVTQGQKGP 
QAENVTVIG