Gene Shewana3_2558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2558 
Symbol 
ID4479220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3060384 
End bp3061130 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content46% 
IMG OID639727161 
Product3-oxoacyl-[acyl-carrier-protein] reductase 
Protein accessionYP_870191 
Protein GI117920999 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000120967 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATCA ATCTGAGTTT AGCGGGCAAA GTTGCCTTAG TGACAGGCGC GAGCCGTGGT 
ATCGGCCGTG CGATTGCTGA AACCTTAGTC GAAGCCGGTG CGATTGTGGT AGGAACTGCC
ACAAGTGAGA AGGGCGCCGC AGCAATTCAA GAATATCTGG GTGACAAAGG TTTTGGTTTA
GTGCTTAATG TTACCGATAG TCAATCCGTC ACCGATTTAT TCGATTCGAT CAAAGAAAAA
GCGGGTGATG TTGATATTCT AGTCAACAAC GCGGGTATCA CCCGTGATAA CTTGCTGATG
CGAATGAAAG ATGATGAATG GAACGATATC ATCGATACCA ACCTGACATC ATTGTTCAGA
CTATCAAAAC CTGTGATGCG TACCATGATG AAAAAGCGCT TCGGCCGGAT CATCAATATC
GGTTCAGTGG TAGGCACTAT GGGCAATGCA GGTCAAGTTA ACTACTCGGC AGCAAAAGCT
GGTTTGATCG GATTTACAAA ATCTCTTGCA AGAGAGGTTG CATCTCGTCA AATTACAGTT
AATGCTATCG CTCCTGGATT TATCCAGACC GATATGACTG ATGAGCTGAC CGAAGATCAG
CAAAAAGCTA TCATGTCTCA GGTTCCGATG GAACGATTAG GGCAAGCGCA AGAAATTGCC
AATGCCGTAC TCTTCTTGGC GTCGGATTCT GCCGCTTATA TCACAGGCGA GACTTTGCAT
GTGAATGGCG GAATGTACAT GGTTTAA
 
Protein sequence
MSINLSLAGK VALVTGASRG IGRAIAETLV EAGAIVVGTA TSEKGAAAIQ EYLGDKGFGL 
VLNVTDSQSV TDLFDSIKEK AGDVDILVNN AGITRDNLLM RMKDDEWNDI IDTNLTSLFR
LSKPVMRTMM KKRFGRIINI GSVVGTMGNA GQVNYSAAKA GLIGFTKSLA REVASRQITV
NAIAPGFIQT DMTDELTEDQ QKAIMSQVPM ERLGQAQEIA NAVLFLASDS AAYITGETLH
VNGGMYMV