Gene Shewana3_2555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2555 
Symbol 
ID4479217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3057397 
End bp3057876 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content50% 
IMG OID639727158 
Productthioesterase superfamily protein 
Protein accessionYP_870188 
Protein GI117920996 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0159828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGTA TCGATAGACA AATTACCCTG AGATTTTTGT CTGAGCCTGC GGATGTGAAT 
TTTGGTGGTA AGGTTCACGG TGGCGCTGTG ATGAAATGGA TTGACCTTGC GGCCTATGCC
TGCGCAGCAG GTTGGAGTGG TAAATATTGC ATTACCGCCT ATGCGGGGGG GATCCGATTT
GTACAACCGA TCCTAGTGGG CAATATTGTT GAAGTCAGCG CTAAGGTGAT TTATACCGGC
AAGACCTCGA TGCATATCGG GATTGATGTA CGGGCAGGGG ATCCTAAGAT CTCTGAGCGC
CATCTCACGA CTCATTGTAT CGTTATCATG GTTGCCGTGG ATGAAAACGG ACAACCGACA
CCCGTGCCTG AATGGGTGCC GCAGACTGAG CATGATATTC ATCTGCGTGA TTCTGCGCTG
CGCTTAATGG AAATGCGCAA GAAAATTGGC GCCGAAATGG AAGCTCACGT GCAAAAGTGA
 
Protein sequence
MAGIDRQITL RFLSEPADVN FGGKVHGGAV MKWIDLAAYA CAAGWSGKYC ITAYAGGIRF 
VQPILVGNIV EVSAKVIYTG KTSMHIGIDV RAGDPKISER HLTTHCIVIM VAVDENGQPT
PVPEWVPQTE HDIHLRDSAL RLMEMRKKIG AEMEAHVQK