| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2544 |
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| Symbol | upp |
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| ID | 4479206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3041754 |
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| End bp | 3042380 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639727147 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_870177 |
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| Protein GI | 117920985 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000155874 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTTG TCGAGGTTAA ACACCCGTTA GTGCGTCACA AAATCGGCCT GATGCGTGAA
GGTGACATTA GCACTAAACG TTTCCGCGAG CTAGCCGCCG AAGTGGGCAG CTTGTTAACC
TATGAAGCTA CCGCAGATTT CGAAACCGAA ACTGTTACGA TTGAAGGCTG GAATGGTCCA
GTTGAAGTGG ATCAGATCAA GGGCAAAAAA GTGACTGTTG TGCCAATCCT GCGTGCGGGT
TTAGGTATGA TGGACGGTGT ACTTGAGCAT ATTCCAAGTG CGCGTATTTC GGTTGTAGGT
ATCTACCGCG ACGAAGAAAC CTTAGAGCCA GTGCCATATT TTGAAAAGCT GGCCAGCGAT
ATGAACGAGC GTATTGCACT GATCGTTGAC CCTATGCTGG CAACCGGCGG CTCTATGATT
GCGACGATCG ATCTGCTGAA AAAACGCGGT TGTACGTCAA TTAAAGCCCT AGTGTTAGTC
GCTGCGCCTG AAGGGATTAA AGCCCTTGAA GCGGCTCACC CAGATGTAGA GCTGTATACT
GCCGCTATCG ACAGATGCTT AAACGAGAAA GGCTATATTC TGCCTGGTTT AGGCGATGCC
GGTGATAAAA TCTTCGGTAC TAAATAA
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| Protein sequence | MKVVEVKHPL VRHKIGLMRE GDISTKRFRE LAAEVGSLLT YEATADFETE TVTIEGWNGP
VEVDQIKGKK VTVVPILRAG LGMMDGVLEH IPSARISVVG IYRDEETLEP VPYFEKLASD
MNERIALIVD PMLATGGSMI ATIDLLKKRG CTSIKALVLV AAPEGIKALE AAHPDVELYT
AAIDRCLNEK GYILPGLGDA GDKIFGTK
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