| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2540 |
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| Symbol | |
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| ID | 4477596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3037023 |
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| End bp | 3037691 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639727143 |
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| Product | ribonuclease T |
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| Protein accession | YP_870173 |
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| Protein GI | 117920981 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000100926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA TTAGCGACGC AAACAAATTG AAACACCGAT TTCGAGGCTA CTTTCCGGTA
GTGATAGATG TCGAAACCGC GGGCTTCAAC TCTCAAACCG ATGCGTTGCT GGAAATAGCC
GTCACGCTGT TAAAAATGGA TGATGAAGGC TTGCTCGGCA TTGATAAAAC CCTGCATTTC
AATATTGAGC CCTTTGAAGG CGCCAACTTA GAACCTGAGG CGCTGGCCTT TAATGGTATT
GATCCCACCA ATCCATTACG CGGCGCCGTA AGCGAAAAAG AAGCCTTCTT AGAGATTTTT
AAAGCCGTTA AAAAGGCGCA GAAGGCCTCA GATTGTCACC GCAGTATTAT CGTGGCGCAC
AATGCCGCCT TCGATCATGG CTTTGTGAGT AAAGCGATTG AGCGCTGTGA CTTAAAACGA
TCCCCCTTCC ACCCTTTTGC CACCTTTGAT ACGGCAACAC TCGCAGGCTT AGCGATTGGC
CATACCGTGC TGGCCAAAGC CTGCATCATG GCGGGGATCC CTTTCGATAA TAAAGAGGCT
CACTCAGCAC TTTACGATAC CGAGCGCACC GCAGAGCTGT TTTGCCATAT CGTCAACCGC
TGGAAGCAGT TAGGTGGTTG GCCATTATTA GCCGCGGGTG AGTCAGAGGA TGCAGATGGT
GAGGAATAG
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| Protein sequence | MSDISDANKL KHRFRGYFPV VIDVETAGFN SQTDALLEIA VTLLKMDDEG LLGIDKTLHF
NIEPFEGANL EPEALAFNGI DPTNPLRGAV SEKEAFLEIF KAVKKAQKAS DCHRSIIVAH
NAAFDHGFVS KAIERCDLKR SPFHPFATFD TATLAGLAIG HTVLAKACIM AGIPFDNKEA
HSALYDTERT AELFCHIVNR WKQLGGWPLL AAGESEDADG EE
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