Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2540 |
Symbol | |
ID | 4477596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3037023 |
End bp | 3037691 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639727143 |
Product | ribonuclease T |
Protein accession | YP_870173 |
Protein GI | 117920981 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000100926 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATA TTAGCGACGC AAACAAATTG AAACACCGAT TTCGAGGCTA CTTTCCGGTA GTGATAGATG TCGAAACCGC GGGCTTCAAC TCTCAAACCG ATGCGTTGCT GGAAATAGCC GTCACGCTGT TAAAAATGGA TGATGAAGGC TTGCTCGGCA TTGATAAAAC CCTGCATTTC AATATTGAGC CCTTTGAAGG CGCCAACTTA GAACCTGAGG CGCTGGCCTT TAATGGTATT GATCCCACCA ATCCATTACG CGGCGCCGTA AGCGAAAAAG AAGCCTTCTT AGAGATTTTT AAAGCCGTTA AAAAGGCGCA GAAGGCCTCA GATTGTCACC GCAGTATTAT CGTGGCGCAC AATGCCGCCT TCGATCATGG CTTTGTGAGT AAAGCGATTG AGCGCTGTGA CTTAAAACGA TCCCCCTTCC ACCCTTTTGC CACCTTTGAT ACGGCAACAC TCGCAGGCTT AGCGATTGGC CATACCGTGC TGGCCAAAGC CTGCATCATG GCGGGGATCC CTTTCGATAA TAAAGAGGCT CACTCAGCAC TTTACGATAC CGAGCGCACC GCAGAGCTGT TTTGCCATAT CGTCAACCGC TGGAAGCAGT TAGGTGGTTG GCCATTATTA GCCGCGGGTG AGTCAGAGGA TGCAGATGGT GAGGAATAG
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Protein sequence | MSDISDANKL KHRFRGYFPV VIDVETAGFN SQTDALLEIA VTLLKMDDEG LLGIDKTLHF NIEPFEGANL EPEALAFNGI DPTNPLRGAV SEKEAFLEIF KAVKKAQKAS DCHRSIIVAH NAAFDHGFVS KAIERCDLKR SPFHPFATFD TATLAGLAIG HTVLAKACIM AGIPFDNKEA HSALYDTERT AELFCHIVNR WKQLGGWPLL AAGESEDADG EE
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