| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2531 |
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| Symbol | tolB |
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| ID | 4477587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3027534 |
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| End bp | 3028862 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639727134 |
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| Product | translocation protein TolB |
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| Protein accession | YP_870164 |
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| Protein GI | 117920972 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000171266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.044306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT TGGCAAAATG GTTAGCATTG GCGGTTCTGC TTTGCACTAT GCCGGCAAAA
GCGGCGCTGG ATATTGTGAT CACTGAGGGT GTGGATGCGG CGCGTCCAAT CGCAGTGATG
CCATTCCAAT GGCAAGGTGC GGGTGCGCCA CCCCAGGCGA TCGCCGATGT GGTGATGTCT
GACTTAATTC GTAGCGGTAC CTTCAAACCA TTAGATGAAT TAGGGTTACC ACAACGTGGT
ATCGGTGCCT TAGCCCAGTT TGACGCGAGC GCGTGGGCCA ATGTCGGTGC CGAAGCCGTC
GTAGTCGGCT CGGTAAAACC TTATGGTACG GACCAGTTTT TGGTGAGCTT TGACCTTATC
GATTTGGTTA AAGCGCAAAA CCAAGCGCTA AAAGGCCCTA CCAGTGCGAC AGAGTTTTTG
ATGGACAGTC GCCAAACAGT GATTTCTGCG GCGCAGTTCC GTCAATATGG CCACCGTATT
AGCGATATCG TCTATGAGAA GCTTACTGGT ATTCGTGGCG CTTTCTTAAC CCGTATTTCC
TACGTGGTGG TGAATCACAC TCAGAAAGCG GCTTATTCAC TGATGATCGC CGACTATGAC
GGTTACAACG AGCAAATGTT ACTGCGCTCT CCTGAGCCGC TGATGTCGCC TTCTTGGTCA
CCCGATGGTC GTCGTTTAGC CTATGTAAGC TTTGAAAACA AAAAGGCTGA GATTTTTGTT
CAGGATCTTT ACACCCAAGT GCGTACTAAG GTGAGCAGCT TCCCTGGCAT TAACGGTGCA
CCGACTTTCT CGCCAGATGG TAAATCCTTG GCTGTGACCC TCTCAAAGGA TGGTCAACCT
GAGATTTACG TTATCGATAT CGCCACTAAG GCGGCAAAAC GTATTACCAA CCACTATTCC
ATCGATACTG AGCCTTCTTG GTATCCCGAT GGCAAGTCAT TGTTGTTTAC CTCCGAGCGC
GGTGGTAGAC CACAGTTATA TCGTGTAGAT TTAAATTCAG GCAAAGTGAC CCGTGAAACC
TTTGAAGGTG AATGGAATTT AGGTGGTTCA ATTACCCCTG ATGGTCGCAG CATGATTTTT
GTGAATCGCA CAAACGGTAA ATTTAATATT GCACGTATGG ATTTAAGTAC GCGCTTTATG
CAGGTGCTGA CATCGACACG TTTGGACGAA TCTCCAAGTG TGGCCCCTAA TGGTACTATG
GTGATTTATG GCACCACGTA TCAAGGCAAG CAAGTTTTAG CAGCTGTTTC TACGGACGGA
CGCTTTAAAG CGAGATTACC GGTAGGTCAG GGCGAGGTGA AATCACCTTC TTGGTCTCCG
TTTCTCTAA
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| Protein sequence | MKILAKWLAL AVLLCTMPAK AALDIVITEG VDAARPIAVM PFQWQGAGAP PQAIADVVMS
DLIRSGTFKP LDELGLPQRG IGALAQFDAS AWANVGAEAV VVGSVKPYGT DQFLVSFDLI
DLVKAQNQAL KGPTSATEFL MDSRQTVISA AQFRQYGHRI SDIVYEKLTG IRGAFLTRIS
YVVVNHTQKA AYSLMIADYD GYNEQMLLRS PEPLMSPSWS PDGRRLAYVS FENKKAEIFV
QDLYTQVRTK VSSFPGINGA PTFSPDGKSL AVTLSKDGQP EIYVIDIATK AAKRITNHYS
IDTEPSWYPD GKSLLFTSER GGRPQLYRVD LNSGKVTRET FEGEWNLGGS ITPDGRSMIF
VNRTNGKFNI ARMDLSTRFM QVLTSTRLDE SPSVAPNGTM VIYGTTYQGK QVLAAVSTDG
RFKARLPVGQ GEVKSPSWSP FL
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