Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2530 |
Symbol | |
ID | 4477586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3026951 |
End bp | 3027487 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639727133 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_870163 |
Protein GI | 117920971 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000768197 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.037684 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGA ACAAGTTGTT AAAAGCTATG TTGGTAGCAC TTCCAATTAT GGCTATTAGT GCGTGTAGCT CAACTTCTGA ATCAGAAACT GATGCAATGG GCTCTACAAA CGGTTCTGGT AGCGAACTGA ATGGTGGTGG CGTTCAAACT GGCGGTATTG GTGGAATGTT GTCACCTGAA GAGCAACAAC GTCAGCAACT CGAGCAGTTG AGAAAAGAAC ACATCATTTA CTTCGACTTC GACCGCAGTG AAGTTCAAAC TGAATTCGCC GCCGTACTCG AAGCCCACGG TACTTATTTA GTTGAGCACC CAAGCGTACG CGTATTGATT GAAGGTCATG CCGACGAGCG TGGCACGCCA GAATACAACA TCGCACTGGG TGAGCGTCGT GCTAAAGCTG TTGCTAAATA CTTACAAGGC ATGGGTGTAC AACCTAGCCA AATGAGCATC GTAAGCTATG GCGAAGAAAA GCCACTTGAC TTCACTCGTA CCGATGAAGG TTTTGCTAAA AACCGTCGTG CAGTTTTAGT TTACTAA
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Protein sequence | MDLNKLLKAM LVALPIMAIS ACSSTSESET DAMGSTNGSG SELNGGGVQT GGIGGMLSPE EQQRQQLEQL RKEHIIYFDF DRSEVQTEFA AVLEAHGTYL VEHPSVRVLI EGHADERGTP EYNIALGERR AKAVAKYLQG MGVQPSQMSI VSYGEEKPLD FTRTDEGFAK NRRAVLVY
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