| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2529 |
|---|
| Symbol | |
|---|
| ID | 4477585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 3026174 |
|---|
| End bp | 3026926 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639727132 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_870162 |
|---|
| Protein GI | 117920970 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000104047 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0224917 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTG CCGTCTTAAT TACGGCAATG TTCTTCGGCG CAGGAGCTGC AGTGGCAGCT
CCTGCTCCTG TTGAAGATAT TGCTGGTGGT TCAGGTGATG ACAGACTTGC TCGTTTAGAG
CGCATTGTAA AATCGAGACA ACAAAGCGAA ATTGATATGC AGCGCCGTCT GGATACTTTG
CAGCAAGAAG TTCTCGACTT ACGTGGTTTG ACTGAACAAC AGAATTATCA AATAGAGCAG
ATGCAACAAC GTCAGCGTCA GCTTTACGAT GAAATTGCCA ATTTATCCTC CAAAGCCGCT
GTTGCGCCAG CTGCTTCTAC TCCTGCAACG CCCGCTGCTG TGGCAGCAAG TGCCAATGCC
GCCGCCAGTA GCTTAAGTGA AACGGCCAGC TACGAAAGTG CGGTGAACTT AGTGCTGAAA
GAGCGCAAGT ATGACGATGC TATTCCAGCG TTTCGCGCTT TCATTAAACA GTATCCTGAC
TCAGTCTATG CCGCCAACGC CAACTATTGG TTAGGACAGT TACTGTTTAA TAAGAGTGAA
TTTGCTGAAG CCAAACAAGC CTTCAATACT GTCGTGACCC GTTTTAGTGA TTCCAACAAA
CGTGGCGACA GTCTCGTGAA GCTTGGCATG ATCGCAGAGA AAACCGGTGA TAAAGCCGGC
GCGACTCAAT ACTACCAACA AGTAGTAAAA GACTACGCCA ACAGCGCTGC AGCACGCATT
GCACAACAAC AATTGGCTGC AATTAAAGCA TAA
|
|---|
| Protein sequence | MKRAVLITAM FFGAGAAVAA PAPVEDIAGG SGDDRLARLE RIVKSRQQSE IDMQRRLDTL
QQEVLDLRGL TEQQNYQIEQ MQQRQRQLYD EIANLSSKAA VAPAASTPAT PAAVAASANA
AASSLSETAS YESAVNLVLK ERKYDDAIPA FRAFIKQYPD SVYAANANYW LGQLLFNKSE
FAEAKQAFNT VVTRFSDSNK RGDSLVKLGM IAEKTGDKAG ATQYYQQVVK DYANSAAARI
AQQQLAAIKA
|
|---|
| |