Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2522 |
Symbol | |
ID | 4477573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3015742 |
End bp | 3019182 |
Gene Length | 3441 bp |
Protein Length | 1146 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639727120 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_870157 |
Protein GI | 117920965 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0591] Na+/proline symporter [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00042371 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCTAA CCTTAGTCGT CGCCGTTATT GCTATTTGTT ATGTCTCACT TTTATTCCTT TTAGCCTGGG GCGCGGAGCG TTGGTTTAGC GGCGTGACCA AGAAGCTTCA GGTAGGCATT TATGGTTTAA GTCTGGCGGT TTATTGTTCT TCCTGGAGCT TTTTAGGTAC CGTAGGGCAG TCGGCTAATG ATTTTTGGTC CTTTATCCCG ATTTTTATCG GTCCTATCAT TATTTTCACC TTAGGTTTTG GCATGCTGCG CAAGATGGTC CTCGTGTCCA AGGCGCAAAA TATTACCTCG GTCGCCGACT TTATCGCCGC CCGTTACGGT AAGTCACAAA CCTTGGCGGC CATTGTTACC CTCATCGCGC TATTTGGCAT CATGCCCTAC ATTGCCCTGC AACTTAAGGC GATGGTATTT AGCCTTAATT TGTTTCAGCC AGCAGACGAT CCTTTAAACG GCATTACTAT CCCTTTACTT ATCACAGCAT TGCTGGCGAT TTTTGCCATT CTATTTGGGA CGCGTAAGCT CGACGCTACC GAGCATAACC CCGGCATGAT GCTGGCGATT GCCTTTGAAT CGTTAGTCAA ACTGGCGGCA TTTTTGCTGG TGGGGATTGT GATTAGCTTT GGGGTGTTCG ACGGTTTTGG TGATATCTGG CAGCAAGCAA GCGAAAAAGC CTTAATTAAT TACCCAAATC CGCGAATCGA AGCCTTAATG CCTGAGCTAC TCGTTGGCAT GGCTGCGTTT TTATGTATGC CGCGGCAATT CCACGTGATG GTGGTGGAGT GCGCCGATGA GTCGGTGTTG TCAAAGGGGC GCTGGTTGTT CCCGCTGTAT TTGGCCTTAT TTGGCTTATT TGTTGGGCCA CTGGCACTAG CGGGTAAAGT CATCCTTGGG GATAGCGTTG CCGCAGACAC TTATGTGATC AATTTACCGC TTGCGTTAGA TCATCCACTG CTCGCCGTGA TTGCGCTGTT AGGCACTTTA TCAGCGGCGA CTGGCATGGT AATTGTGGCG GTAGTGACAA TAAGCGTGAT GGTGAGTAAC GAGTGGCTGG TGCCCGTGAT GCTGCGCACG GGCAATATCC GTGAGAAAAA CTTTAGCCAG TTTTCGCAGA TGCTGTTAAA TGCACGCCGC CTGGCCATCG TCATCATCCT TGGCCTGGGT TATGGCAGTT ATCTGGCGCT CGCCGACAGT GACTCGCTAT CGCACCTTGG GATGTTATCC TTTGGGGCGT TTGCCCAGCT GGCTCCTGCG CTGGTGGGAG GGCTCTATTG GAAGCACGGT AATCGTGCCG GGGTGTTTTT AGGCTTAAGT GTGGGCTTTG GCCTGTGGTT TTACATCATG CTGAGCGGCA TGAATGACGG CCAAAATGTG GCGACCTTAT TGTCGAGTAA TATCGACCTG TTAGATGCCA TTACCCCCAA TGTGCGCGAT GCGCTCACAG CCTTGTTTGC CAATATTGCC TGCTACATCT TAGGCTCGAT TTGGTTTAGG GCGGGGGTGG CCGAGCGTAT TCAAGCCAGC GCCTTTGTCA GCCCGGGTAA GCTTAAAAAT AATGCCAATA AGAAAAATGG CCCTATCTCC CAGCAGGACT TGCTTATCTT AGCCAGCCGC TTTGTTAGCC CAACCCGCGC CTATGAAAGC TTTAGCCGAT TCTCAACTGA GGCGGTTAAG AGTGACAGCT GGCACAAGGC CGCAACCCCT GAGCTTATCG CCCACACCGA ACGCTTACTC GCCGGGGTGC TTGGCGCATC GAGTGCTTCC TTGGTAATGG ACTCAGTTTT ACAGGGGCGC GACTTGGCGC TCGATGAGGT CTTTAGCCTT GTCGATGAAG CCTCATCGAA AATCATGCTC AGCCAAGATA TGCTGCGCGG GGCTATCGAG CATGCCTATG AGGGGATGAG TGTTATCGAC AGCGACCTTA ACTTGGTGGC ATGGAACTAC AAATACGTGG AGCTGTATCA ATATCCTGAA GGTTTTTTAC AGCAAGGTAT GCCGATTGGC GAAGTGATCC GCTTTAACGC GGCGCGGGGA TATTGCGGCG AGGGGGATAT TGAGTCGCAG GTCGAAAAAC GTGTGCAGCA TATGCGTAAT GGCACGCCGC ATACCTCAGA GCGGCAACGT AAAGACGGTA AAGTGATTAA AATTCAAGGC AATCCTATGC CAGATGGCGG CTTTGTGATG ACTTTTACCG ACATCACTCA ATACCGCGAG CAGGAACGGG CTTTGCTTGA GGCCAATGAA ACCCTCGAAT CGCGCGTTAA AGAGCGAACC TACGAGTTAG CCATGCTAAA CAGTGAATTA CTTGAGGCCA AGGCGCAGGA AGAAATGGCG AACGCTTCTA AGAGTCGCTT TTTAGCGGCG GTAGGGCACG ATTTAATGCA ACCCTTAAAT GCGGCAAGGC TGTTTACTGC TTCTTTGTCC CAATACCCTA ATTTGGACCG CGAGGCGCGC ACCACCCTAT CCCATGTAAA TAGCTCGCTC AAAACAGCGG GCGAGTTGCT CACCGACTTA TTGGATATTT CGAAGCTGGA TTCCGGCATG GTGGAGGTCA ATCGCCGCGA CTTTGCCATA TCCGAGCTGC TCAATGGTCT GTCGGTCGAA TTTGAGGCGA TGGCGGCGGA CAATCAAATT CGCTTTAAGA TGGTCCCCTG TAGCGCGACG GTTAATTCCG ATCCTTCGTT ACTGCGGCGT GTGCTGCAAA ACTTCTTAAC CAATGCTTAC CGTTATGCCC GAGGTGGGCG GGTGCTGTTT GGCTGTCGCC ATCGCGGCAG TGAGTTAGAG ATCCAAGTAT TAGATACGGG CTGCGGGATT GATGAGCACG AAACCCGTGA AATTTTCAAA GAGTTTAAGC GCTTAAATAA TCCACGTAGT AAAAGCGTTA GCGGCCTTGG CCTAGGGTTG GCGATTGCCG ATAGGATCAG CCGGGTACTA AACCACAGTA TTCAAGTGTC CTCACAACTT GGACGTGGTT CAGTGTTCTC TATAAGTGTG CCTTTAGGGG AAACCGTGCG TCAGCCGCAG GTGAAGGCGT TGCCATCGCT ATTGCAACCT TTGTCTGGCA TTAAAGTGCT ATGCATCGAC AACGAAGAGG CCATTTTGGC GGGGCTTGAG AGTCTACTCA GCCGCTGGCA GTGTGAGGTG ATTTGCGCCA AGGATTTAGC CGATGCGCGC ATAAAGTTAG GCCTAAAAGG GGTGGCGCCG GATATTGTTT TAGCGGATTT CCACTTGGAC GATGGCCAAA ATGGTGTCGA TGCGATGGAT GGGATCCGCG CGCTCTATGG CAAAGAGTTA CCGGGCATTT TAATCACGGC CAATACCCGT AAGGAGCTGG TGGAGGATGT GCAGCGCCGG GGTTACCACT ATATGGCGAA AATGATTAAA CCGGCGGCGC TGCGGGCATT GATTTCGAGC CTAGTCAAGG CGAGTCGTTA A
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Protein sequence | MNLTLVVAVI AICYVSLLFL LAWGAERWFS GVTKKLQVGI YGLSLAVYCS SWSFLGTVGQ SANDFWSFIP IFIGPIIIFT LGFGMLRKMV LVSKAQNITS VADFIAARYG KSQTLAAIVT LIALFGIMPY IALQLKAMVF SLNLFQPADD PLNGITIPLL ITALLAIFAI LFGTRKLDAT EHNPGMMLAI AFESLVKLAA FLLVGIVISF GVFDGFGDIW QQASEKALIN YPNPRIEALM PELLVGMAAF LCMPRQFHVM VVECADESVL SKGRWLFPLY LALFGLFVGP LALAGKVILG DSVAADTYVI NLPLALDHPL LAVIALLGTL SAATGMVIVA VVTISVMVSN EWLVPVMLRT GNIREKNFSQ FSQMLLNARR LAIVIILGLG YGSYLALADS DSLSHLGMLS FGAFAQLAPA LVGGLYWKHG NRAGVFLGLS VGFGLWFYIM LSGMNDGQNV ATLLSSNIDL LDAITPNVRD ALTALFANIA CYILGSIWFR AGVAERIQAS AFVSPGKLKN NANKKNGPIS QQDLLILASR FVSPTRAYES FSRFSTEAVK SDSWHKAATP ELIAHTERLL AGVLGASSAS LVMDSVLQGR DLALDEVFSL VDEASSKIML SQDMLRGAIE HAYEGMSVID SDLNLVAWNY KYVELYQYPE GFLQQGMPIG EVIRFNAARG YCGEGDIESQ VEKRVQHMRN GTPHTSERQR KDGKVIKIQG NPMPDGGFVM TFTDITQYRE QERALLEANE TLESRVKERT YELAMLNSEL LEAKAQEEMA NASKSRFLAA VGHDLMQPLN AARLFTASLS QYPNLDREAR TTLSHVNSSL KTAGELLTDL LDISKLDSGM VEVNRRDFAI SELLNGLSVE FEAMAADNQI RFKMVPCSAT VNSDPSLLRR VLQNFLTNAY RYARGGRVLF GCRHRGSELE IQVLDTGCGI DEHETREIFK EFKRLNNPRS KSVSGLGLGL AIADRISRVL NHSIQVSSQL GRGSVFSISV PLGETVRQPQ VKALPSLLQP LSGIKVLCID NEEAILAGLE SLLSRWQCEV ICAKDLADAR IKLGLKGVAP DIVLADFHLD DGQNGVDAMD GIRALYGKEL PGILITANTR KELVEDVQRR GYHYMAKMIK PAALRALISS LVKASR
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