Gene Shewana3_2512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2512 
Symbol 
ID4477563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3002225 
End bp3003088 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content50% 
IMG OID639727110 
Productheat shock protein HtpX 
Protein accessionYP_870147 
Protein GI117920955 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000804246 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000151109 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCGTA TTTTTTTATT AATTGCGACT AACCTAGCCG TGTTGCTGGT AGCCTCAATT 
GTGATGTCTA TTCTGGGCGT GAATACGTCG ACTATGGGTG GACTGCTTGT GTTCGCTGCG
ATTTTTGGAT TCGGCGGAGC CTTCATCAGC TTAGCCATTT CAAAATGGAT GGCGAAAAAG
ACCATGGGCT GTGAAGTGAT CACCACTCCC CGTGATAGCA CAGAGCGTTG GTTATTAGAC
ACTGTTGCCC GTCAAGCGCA GCAAGCTGGG ATTAAAATGC CAGAAGTGGC AATTTACCAA
TCGCCAGAGA TGAATGCCTT CGCCACAGGC CCAAGCAAAG ACAACTCATT AGTTGCCGTG
AGTACCGGTC TGTTGTATGG CATGAGCCAA GACGAAGTTG AAGGCGTACT CGCCCACGAA
GTGAGCCACG TTGCCAACGG CGACATGGTG ACCTTGACCT TAATTCAAGG CGTGGTGAAC
ACCTTTGTTA TCTTCGCGGC ACGTGTTGTT GCGGGCATTA TCAACAACTT CGTCTCGAGC
AACGATGAAG AGGGTGAAGG TTTAGGCATG TTCGCCTATA TGGCGGTCGT GTTTGTCCTC
GACATGTTGT TTGGTATCTT GGCCTCGATC ATCGTGGCTT ACTTCTCACG TATCCGTGAA
TACCGTGCTG ACGAAGGTGC GGCGCGTTTA GCGGGCAAAC ATAAGATGAT TGCAGCGCTT
GAGCGTTTAC GCCAAGGCCC TGAAAGCTCG GCAATGCCAG CACAAATGTC GGCTTTTGGT
ATTAACGGTA AGCGTTCAAT GGCTGAGCTG ATGATGAGCC ACCCGCCATT AGAGAAGCGT
ATCGCCGCCT TACAAACTCG TTAA
 
Protein sequence
MKRIFLLIAT NLAVLLVASI VMSILGVNTS TMGGLLVFAA IFGFGGAFIS LAISKWMAKK 
TMGCEVITTP RDSTERWLLD TVARQAQQAG IKMPEVAIYQ SPEMNAFATG PSKDNSLVAV
STGLLYGMSQ DEVEGVLAHE VSHVANGDMV TLTLIQGVVN TFVIFAARVV AGIINNFVSS
NDEEGEGLGM FAYMAVVFVL DMLFGILASI IVAYFSRIRE YRADEGAARL AGKHKMIAAL
ERLRQGPESS AMPAQMSAFG INGKRSMAEL MMSHPPLEKR IAALQTR