Gene Shewana3_2510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2510 
Symbol 
ID4477561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3000734 
End bp3001480 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content48% 
IMG OID639727108 
Productcytochrome B561 
Protein accessionYP_870145 
Protein GI117920953 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00451745 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000518904 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCAACC CGCAGCCAAG CTCTATTGAA ATGCAGTCCT ATCGCGTGTG GGACAGACCC 
ACGCGTCTGT TCCACTGGAT TAATCTCATC CTCGTACTCG CCCTGCTTAT CGTTGGCGGC
ATGATGATGT TTCGCAGCAA CTTAGGCATT ACCGAACTCT CCGGCAAAAT TGGGCTTAAG
ACCCTGCACG TCATCATTGG CTATGGCTTT GCAATTAATT TACTGATCCG CCTAGTTTGG
GGTTTTATGG GCAATAAATT CGCCCGCTTT AGCCATATGT TCCCCAATGC CAATAGCAAG
AACGAGTTAC AAAACTATAA AGCGGAACTT GCCGCGGGTA AAAATCCCCA GTATCTAGGC
CACAATCCTA AGGGGAAATT CGCCGTACTC GCCATCATGC TCTTGCTTGT CACCATAATG
ATCACAGGCC TGATTCGCGC AGGTACTGAT ATTTACTATC CGCCGCTCGG CAGCACAGTA
CAAAGCTACT TAGCCGCAGC GGATGTTGAG CCAAGTAGCT TAAAACCCTA CGATGCTACA
GGCGTAGATA CCGATAAAGC CAATGCTATC AAGCCCATGA AGGGACTTGC CGGTGAAGTA
CACGTTTACG CCGTGTACTT ATTAATGCTC CTTATCGTGC TGCATGTGTT TGCCGTGATT
TATACCGAAA TCAAACGCCA ACCCGGGATC ATTTCCGCCA TGTTTTCTGG CAAAAAACTG
ATCCAAGGAC AACCGAAGGA CGAGTGA
 
Protein sequence
MSNPQPSSIE MQSYRVWDRP TRLFHWINLI LVLALLIVGG MMMFRSNLGI TELSGKIGLK 
TLHVIIGYGF AINLLIRLVW GFMGNKFARF SHMFPNANSK NELQNYKAEL AAGKNPQYLG
HNPKGKFAVL AIMLLLVTIM ITGLIRAGTD IYYPPLGSTV QSYLAAADVE PSSLKPYDAT
GVDTDKANAI KPMKGLAGEV HVYAVYLLML LIVLHVFAVI YTEIKRQPGI ISAMFSGKKL
IQGQPKDE