| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2508 |
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| Symbol | |
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| ID | 4477559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2997880 |
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| End bp | 2999646 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639727106 |
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| Product | peptidase M61 domain-containing protein |
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| Protein accession | YP_870143 |
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| Protein GI | 117920951 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000376919 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCACT ATCACATCAT TCCCGTCGAT CCCAAGGCGC ACTTGTTCGC CGTCACCATG
ACGGTACAAA CGCCTCACCC TAAGCAAGTT TTTAGCCTGC CCGCGTGGCT TCCTGGCAGT
TATATGGTGC GGGATTTTGC TAAGAATATT ATCGACCTCA AAGCCACAGG CGCTAACGGT
GAGCCGCTTA CGCTCACTCA GCTGGATAAA CAAACCTGGT CGGTTGAACA TCAAAGCACG
CAGCTCACCT TAACCTATCA AGTTTATGCT TGGGACTTGT CGGTACGCAC CGCACACCTC
GATATGACCC ACGGTTTCTT TAACGGTAGC AGTGTATTTT TAGCCGCCCA CGGCTTTGAG
GCAGGCTTAC ACACCGTGAC GATGGCGGCG CCGACCGAGC CGAGCCTAAA TGAGTGGCGC
CTTGCCACCA GCATGACACG CCAAAGCGGT GATGAATTTG CCTTTGGTGA GTTTTGCGCG
CAAAGCTATG ACGATCTTAT CGACCATCCG GTAGAAATGG GCCTATTCAC CCAAGCCAGT
TTCGAAGCCA GCGGAGTCAG ACACGATATC GTACTAAACG GTCGCCACCG CGCCCATATG
CCGAGACTCT GCCAAGATTT AAAGGCAATT TGCGAGTATC AAATCAAACT GTTTGGCACG
CCTGCGCCCT TTGAACGTTA TCTGTTTATG ACGACAGTGC TCGACAATGG TTTTGGTGGA
TTAGAACATA GGGCATCGAC GGCACTCATG TGCTCGCGCA AGGATTTACC GCTGTCGATG
GATGCGCCGA TTAATAACGA CTATCGCACC TATTTATCGC TCTGCAGCCA TGAGTATTTC
CACAGCTGGA ACGTCAAGCG CATCAAGCCA GAATGCTTCT TACCCTATCA ACTCGAGGCG
GAAGCCTATA CGCCGCAGCT GTGGGCCTAT GAGGGCATCA CCTCCTATTA TGATGATTTC
CTCACTTATC GCGCAGGCTT AGTCGATGAG CAAAGCTACT TAGATATGCT GAGCGAAACC
TTTACAAGGG TATATCGCAG TCAAGGCCGC TTTAAACAAA GCATTAAGGA CTCCAGCTTT
AACGCTTGGA CTAAGTTCTA TAAGCAGGAT GAGAACGCCC AAAACGCCAT TATCAGTTAT
TACACTAAGG GCGCCCTGTT TGCCCTGTAT CTTGATTTAA CACTAAGAAG CGAAACCCAA
GGTAAATACA ATCTCGACGA TGTGATGACC ATTTTGTGGC AGGAATATGC CCTGCAAAAT
CGTGGCACCA CAGACGAATG CCATCAAAGG ATTGTTGAAC GCTTATTGGG GCGTGATTGC
CAAGATCTCT TCGCCTATTT AGACAATACC GACGATATTC CACTGGCGCC GCGACTTGCC
GAGTTTGGGG TTGAATTGAC CTTACGCGCG AGCAATGGCG CACAGGATGT CGGCGGTGGC
ACGGCTAAAG GGTATGAAAT TGCCTTTGGC GCTAAGACGC AAGCCGCGCC AATGGGCCTT
AAAGTGACCA CTGTCGCCCA AGGCAGCCCT GCGCACCTTG CGGGCTTAAG CGCCGGAGAT
ATCTTAATTG CGGCGGATAA TCTGCAGGTG ACAGGCCAAT TTGAGGCGCA GCTTCAGCAA
TACCCACTCG GACAACGCTT AAGCCTACAT TGGTTTAGAC GCGATGAATT GATGACGGGA
GAACTGATTA TTGCTGAGGC GCCAAAGGAT ACAGTTGCCT TAAGCATCAC AGATAAAGAT
AAACTCCAGG CTTGGTTGGG TCGCTAA
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| Protein sequence | MIHYHIIPVD PKAHLFAVTM TVQTPHPKQV FSLPAWLPGS YMVRDFAKNI IDLKATGANG
EPLTLTQLDK QTWSVEHQST QLTLTYQVYA WDLSVRTAHL DMTHGFFNGS SVFLAAHGFE
AGLHTVTMAA PTEPSLNEWR LATSMTRQSG DEFAFGEFCA QSYDDLIDHP VEMGLFTQAS
FEASGVRHDI VLNGRHRAHM PRLCQDLKAI CEYQIKLFGT PAPFERYLFM TTVLDNGFGG
LEHRASTALM CSRKDLPLSM DAPINNDYRT YLSLCSHEYF HSWNVKRIKP ECFLPYQLEA
EAYTPQLWAY EGITSYYDDF LTYRAGLVDE QSYLDMLSET FTRVYRSQGR FKQSIKDSSF
NAWTKFYKQD ENAQNAIISY YTKGALFALY LDLTLRSETQ GKYNLDDVMT ILWQEYALQN
RGTTDECHQR IVERLLGRDC QDLFAYLDNT DDIPLAPRLA EFGVELTLRA SNGAQDVGGG
TAKGYEIAFG AKTQAAPMGL KVTTVAQGSP AHLAGLSAGD ILIAADNLQV TGQFEAQLQQ
YPLGQRLSLH WFRRDELMTG ELIIAEAPKD TVALSITDKD KLQAWLGR
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