Gene Shewana3_2507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2507 
Symbol 
ID4477558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2997378 
End bp2997734 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content50% 
IMG OID639727105 
Producthistidine triad (HIT) protein 
Protein accessionYP_870142 
Protein GI117920950 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000542969 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGAAG AAACCATTTT CAGCAAAATT ATCCGCCGCG AAATTCCCGC CGACATTCTG 
TATCAAGACG AGCTGGTGAC GGCATTTAGA GACATTTCGC CAAAGGCGCC AACCCATATT
CTGATTGTGC CGAATCATTT GATCCCAACT GCAAATGATA TGAAAGCCTC GGATGAACCT
GCACTCGGCC GGATGATGAC AGTGGCGGCT AAACTCGCGG CTGAGGCGGG GATTGCCAAA
GACGGTTATC GTTTGATCAT GAACTGCAAC AAACATGGCG GACAGGAAGT GTACCATATC
CATATTCATC TCGTCGGCGG AGAGCCATTG GGACCCATGC TGAGCCAAGG TCAATGA
 
Protein sequence
MAEETIFSKI IRREIPADIL YQDELVTAFR DISPKAPTHI LIVPNHLIPT ANDMKASDEP 
ALGRMMTVAA KLAAEAGIAK DGYRLIMNCN KHGGQEVYHI HIHLVGGEPL GPMLSQGQ