Gene Shewana3_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2506 
Symbol 
ID4477557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2996854 
End bp2997381 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content52% 
IMG OID639727104 
Producthypothetical protein 
Protein accessionYP_870141 
Protein GI117920949 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000551148 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGTTA ATCCCGAGTT TTTTCCGCTG ACTCAAATGG CGCAGCGATT TGTCGATCAG 
CTCGCCCAGT GCCGCCGCTT AGGGCTCACC GTGCTCGAGG CCAGTGAGCA TCATGTACTG
ATTGAGTTGC CCTATAGCAC TGAGTTAATT GGTTATCCCG ATACAGGTGT TATCCATGGC
GGGGTGATCA CCACCCTGAT GGACACCGCC TGTGGCAGCG CTGTAGTGAG TGCGATTTTT
CAAAAATATC AATCCTTAGA GATTTCGCCC ACCCTCGACT TACGGGTCGA TTATATGAAG
CCCGCCCAGC CCCATAAGCC AGTTTATGGC TTTGCCGAGT GCTATAAGTT GTCATCTAAT
ATCGCCTTTA CCCGCGCCAT CGCCTATCAG GACAGCATTG ATGATCCTAT CGCCCATGCG
GTGGGCTCCT TTATGCGCAT CAGCCCCGAA ATGGTAGGGG ATGCCTTTAG GCAAGCCTTG
ATGGGAGAAG CCGTGCCGCC CTTAGGAGAG ACAGATGAAC TCAAATAA
 
Protein sequence
MKVNPEFFPL TQMAQRFVDQ LAQCRRLGLT VLEASEHHVL IELPYSTELI GYPDTGVIHG 
GVITTLMDTA CGSAVVSAIF QKYQSLEISP TLDLRVDYMK PAQPHKPVYG FAECYKLSSN
IAFTRAIAYQ DSIDDPIAHA VGSFMRISPE MVGDAFRQAL MGEAVPPLGE TDELK