Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2506 |
Symbol | |
ID | 4477557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2996854 |
End bp | 2997381 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639727104 |
Product | hypothetical protein |
Protein accession | YP_870141 |
Protein GI | 117920949 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000551148 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGGTTA ATCCCGAGTT TTTTCCGCTG ACTCAAATGG CGCAGCGATT TGTCGATCAG CTCGCCCAGT GCCGCCGCTT AGGGCTCACC GTGCTCGAGG CCAGTGAGCA TCATGTACTG ATTGAGTTGC CCTATAGCAC TGAGTTAATT GGTTATCCCG ATACAGGTGT TATCCATGGC GGGGTGATCA CCACCCTGAT GGACACCGCC TGTGGCAGCG CTGTAGTGAG TGCGATTTTT CAAAAATATC AATCCTTAGA GATTTCGCCC ACCCTCGACT TACGGGTCGA TTATATGAAG CCCGCCCAGC CCCATAAGCC AGTTTATGGC TTTGCCGAGT GCTATAAGTT GTCATCTAAT ATCGCCTTTA CCCGCGCCAT CGCCTATCAG GACAGCATTG ATGATCCTAT CGCCCATGCG GTGGGCTCCT TTATGCGCAT CAGCCCCGAA ATGGTAGGGG ATGCCTTTAG GCAAGCCTTG ATGGGAGAAG CCGTGCCGCC CTTAGGAGAG ACAGATGAAC TCAAATAA
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Protein sequence | MKVNPEFFPL TQMAQRFVDQ LAQCRRLGLT VLEASEHHVL IELPYSTELI GYPDTGVIHG GVITTLMDTA CGSAVVSAIF QKYQSLEISP TLDLRVDYMK PAQPHKPVYG FAECYKLSSN IAFTRAIAYQ DSIDDPIAHA VGSFMRISPE MVGDAFRQAL MGEAVPPLGE TDELK
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