Gene Shewana3_2504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2504 
Symbol 
ID4477555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2995880 
End bp2996272 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content50% 
IMG OID639727102 
Producthypothetical protein 
Protein accessionYP_870139 
Protein GI117920947 
COG category[R] General function prediction only 
COG ID[COG5633] Predicted periplasmic lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000152453 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGCAA TTTACAGTGG ATTAATCTTG GCAGCAGCAC TGACACTCGG TGCCTGCACT 
AATACGGCGG GCATTTCGGT GAACTCACTG GGAGAAACCC GCGTCGATAA CAACAGCTTC
GCCCGTGATA TCAGTGTTGA AGGGGTTGAG GCGCGCCGCG TTGGCGATCT TATCCAAGGT
TCGGCCTTGA TCGTCAGCAA GTCCTCAAGT GATATGCGAG TGCAATATAA GTTCACTTGG
TATGATGCCA GCGGCTTTAC CATCGAAGAT GAAGCCACCA GTTGGAAATC GGTGAAATTA
CACGGTAAAC AACAGCTGCA AGTGTCGGCC GTGGCCCCAA ATGCACAAGT GGCGAAATTC
GATGTTTATG TGCGCGAGAC CTATTCAAAC TAA
 
Protein sequence
MKAIYSGLIL AAALTLGACT NTAGISVNSL GETRVDNNSF ARDISVEGVE ARRVGDLIQG 
SALIVSKSSS DMRVQYKFTW YDASGFTIED EATSWKSVKL HGKQQLQVSA VAPNAQVAKF
DVYVRETYSN