Gene Shewana3_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2496 
Symbol 
ID4477547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2986731 
End bp2987603 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content46% 
IMG OID639727094 
Producthypothetical protein 
Protein accessionYP_870131 
Protein GI117920939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.296365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00398106 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAG CTGTGTTGTT AGTGGTGTTG CTATTTGGCT TAACGGCCTG CTCGACCAAA 
TTTAGTTATC ATTTTCTCGA CTGGGCCATA GGTTGGGAGT TGGATGACTA TGTCAGCCTT
GATAAAAACC AACAGAAGGT CGTCGATGGG CTTATCGACA AGTTTGTGCT TTGGCACCAA
TCCGAAGAAC TCGGCCATTA TGTGGCGCAG CTAACCGAAG TTGAGCAGCA GATCCAAACC
AATACCTTAA CTCCCGCATT GTGGGCCGAG CATGTCACGC TCGCCAAACG GCATTGGTTT
CGGTTATTTG AGTTTGCACT GCCGGAAATG TTGCCGATTA TCTCATCGTT AACCGATGAA
CAGGTGAAGC AAATTCTTAC CCAGTCGCGA AAAGACGAGC AGGAATTGAT TAAGGAGTTT
GCCGGTAAAA CCCCCGAGCA GTTACAGCAG GAGGCCGATG AAAATCTTAT CGAGCAATTT
GATGACTGGC TGGGTAGCGT AACGGATGAG CAAAAAACGC TTATTCATCA ATATAATCAA
CAGCGACTGT CGACCTTAGA TATGTGGCTC GATTACCGCC ACGAATGGTT ACGTCAATTT
GAAGTAGCCC TTGGACAGCG CAGCGATATT CCGTTGCTGA CCGAGCGATT GACCCTGCTG
ATGACGCGCC CTGATGAGCT TAAGTCGGAA AAATATCGCA CCATTTTAAG GCAAAATACC
GAAGCATTCG GCGGCTTGTT ACTCACGATC AATGCCAGTC TGTCGGCGAA GCAGTCCAAG
CATTTTTATA AAAAGCTGAA CAAACTTATT CAAGATCTTC GTGAATTAAA TCAAGAGGGG
ATCGAAAAAG TGGCAGAAGC CACGAAAGAT TAA
 
Protein sequence
MKKAVLLVVL LFGLTACSTK FSYHFLDWAI GWELDDYVSL DKNQQKVVDG LIDKFVLWHQ 
SEELGHYVAQ LTEVEQQIQT NTLTPALWAE HVTLAKRHWF RLFEFALPEM LPIISSLTDE
QVKQILTQSR KDEQELIKEF AGKTPEQLQQ EADENLIEQF DDWLGSVTDE QKTLIHQYNQ
QRLSTLDMWL DYRHEWLRQF EVALGQRSDI PLLTERLTLL MTRPDELKSE KYRTILRQNT
EAFGGLLLTI NASLSAKQSK HFYKKLNKLI QDLRELNQEG IEKVAEATKD