Gene Shewana3_2495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2495 
Symbol 
ID4477546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2986087 
End bp2986680 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content50% 
IMG OID639727093 
ProductDoxX family protein 
Protein accessionYP_870130 
Protein GI117920938 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.640487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00764206 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCCTTG TTAACCTTTA TCAAAAATTC CTCAATGCGA GCCGTTATGG TGAGGGGCTT 
GCCCCCTTAG CCCTTAGGCT CTATCTCGCG CCAGTGCTAA TGCAGGCTGG CTATAATAAA
CTCGCACACT TTGAAGACAC TGTGGCTTGG TTTGCTAATC CCGATTGGGG ATTGGGTTTA
CCTATGCCGA CGTTAATGGC TGCCTTGGCA GCGGGCACTG AGTTTTTTGG CGCGTTTTTG
TTACTCGTTG GCTTAGCGAC GCGGCTGATT TCTATCCCTT TGATGATAAC CATGCTGGTG
GCGGCGTTTA CTGTGCATTG GCCTAATGGT TGGCTGGCGA TTGCCGATGG CAGTTCATGG
CTCGCCAATG AGCGGGTGCT TGAGGCGGGT GATAAGCTGG ATAAGGCCAA ATCCCTGTTG
CAGGAATACG GCAATTACGA TTGGTTGACC AGCTCGGGTA ACTTGGTGGT GCTAAATAAT
GGTATTGAGT TCGCAGCGAC CTACTTCATT ATGTTGCTGG CACTCTTTAG CCTAGGAGGC
GGGCGTTATA TCAGTCTCGA TTACTTTATC GCGAAGCGTT ATAACGTAAA GTAA
 
Protein sequence
MSLVNLYQKF LNASRYGEGL APLALRLYLA PVLMQAGYNK LAHFEDTVAW FANPDWGLGL 
PMPTLMAALA AGTEFFGAFL LLVGLATRLI SIPLMITMLV AAFTVHWPNG WLAIADGSSW
LANERVLEAG DKLDKAKSLL QEYGNYDWLT SSGNLVVLNN GIEFAATYFI MLLALFSLGG
GRYISLDYFI AKRYNVK