Gene Shewana3_2457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2457 
Symbol 
ID4477334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2945191 
End bp2947119 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content50% 
IMG OID639727055 
Productpeptidase M1, membrane alanine aminopeptidase 
Protein accessionYP_870092 
Protein GI117920900 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.982771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTAT CCCGTCGTAC CCTCATTAGC AGCGCACTCT TGATGCTGCT GCCATTAGTA 
CAATATGCCA ATGCGGCCAA TACCTTACCG AATACCAGCC TAGCAAGTTC CGCCACAAGC
CAAATGCACT CTGTTACTGA TGAGCTGACC TTTGCCAACT ACCAGCAAGT GAGCATTCAT
CACATCGAAT TGGCATTAAA TGTAGATTTT GCGCAGCAGC AAATCTCGGG GGACGCGACT
CTCGAACTGG ATTGGCATCA GGCCGGAAAA GTGCTGGTGC TCGATACCCG TGACCTTACG
ATTAACAGTG TCAGCATGTT AAATGCAAAC GGCCAATGGC AATCCGTGCC CTTTAGTTTA
GGCGCAGCCG ATAAGGTTAA AGGCGCAGCG CTCACCATCA ATCTACCTCA AGAGCGAGTC
GCTAAAGTCA AAGTTAATTA TCATACTTCC AAGAATCCAT CCGGTATTCA ATGGCTGACT
CCAGAGCAAA CCCAAGGTAA GCAATGGCCA TTTATGTTTA GCCAGAGCCA AGCCATTCAT
GCCAGAAGCT GGATCCCGCT GCAAGATACG CCCGCAGTGC GCCAAACCTA TAGCGCCACT
GTCACCGCTA AGCAAAGCAT TAGTGTCGTC ATGAGTGCCG ACCGAAAGAG CGTGTCTGCG
ACGCAAACCC AATTCACTAT GCCGCAGGCG ATTCCGGCCT ATTTGATTGC CATTGCCGCG
GGACACCTGC AATTTGCCGC CTTAAACGAC ACATCAGGCA TTTGGGCCGA GCCAGAAATG
CTTGCCAAGG CCAGCAAAGA ATTTGCCGAT ACACCGGAGA TGATCGCCAT CGCCGCCAAA
CGTTACGGCG ATTACCGTTG GGGCCGATAC GATTTGCTGA TCCTTCCGCC GAGTTTCCCC
TTCGGCGGGA TGGAAAATCC GCGATTATCC TTTATTACTC CCACAGTCAT CGCGGGAGAT
AAAAGCCTAG TGAGTTTAAT CGCCCACGAG CTGGCTCATT CTTGGTCGGG CAATTTAGTC
ACTAACGCCA CCTGGCGCGA TCTCTGGCTT AACGAAGGTT TTACCACCTA TGTGGAAAAC
CGCATTATGG AAGATCTCTA TGGCCGCGAC CGCGCCCTGA TGGAGCAAAC CATTGGTTAC
TCTGAGCTAT TGGCCGAATT AGCCGAGTTG CCAGCCAGCG ATTCAGTGCT ACATATTGAC
TTAGGCGATC GCGATCCCGA CGATGCTTTT AGCGGTGTCC CCTATGTGAA AGGGCAATTA
TTTTTGCGCT TCCTCGAGCA AAAATTTGGC CGCGAACGGT TCGACACCTT TGTGAAAAGC
TACTTCGATC ACTTTGCGTT TCAAAGCATT ACCACGGAGC AGTTCCGTAG TTACCTCACG
CAGCAGTTAT TGCAAAAATA TCCCAATATC GTCAGTGAGT CCGAAGTGGA TACTTGGGTG
GAGGGACAAG GTTTACCCAG CTTTTTAGTG CCGCCGAACT CGCACGCCTT CGATGATATC
GATGCTCAGC GTCAAGCGTG GTTAGAGGGC AAGCGTGCCG CCAGTTCCCT AAACACTCAG
GGCTGGACAG TGCATCAATG GCTACGCTTT ATTAATGAAA TGCCAAGGCT GAATCTCACT
GAGCAACAAT TAGCCGAGTT AGATAAGGCC TTTCATTTTA CTGGCACCCA CAATAATGAA
ATCGCCTTTG CTTGGTATGC CCTCGCCCTC GATAACGGTT ACTACAGTGT CTTGCCGGCA
CTGAAACAAC ATTTAACCGA GATTGGCCGC CGCAGGCTGA TTGTGCCTTT GTATCAAAAA
CTGGCGAGCA GCGAGCACTA TGACTGGGCA AAAACCGTTT ACTTGGCGGC CCGCAGTGGT
TACCACCCTC AGACCCAAGC GAGTCTCGAT ATGATGTTTA GTGATAAACT GATGGAGCAT
GCCCATTAA
 
Protein sequence
MFLSRRTLIS SALLMLLPLV QYANAANTLP NTSLASSATS QMHSVTDELT FANYQQVSIH 
HIELALNVDF AQQQISGDAT LELDWHQAGK VLVLDTRDLT INSVSMLNAN GQWQSVPFSL
GAADKVKGAA LTINLPQERV AKVKVNYHTS KNPSGIQWLT PEQTQGKQWP FMFSQSQAIH
ARSWIPLQDT PAVRQTYSAT VTAKQSISVV MSADRKSVSA TQTQFTMPQA IPAYLIAIAA
GHLQFAALND TSGIWAEPEM LAKASKEFAD TPEMIAIAAK RYGDYRWGRY DLLILPPSFP
FGGMENPRLS FITPTVIAGD KSLVSLIAHE LAHSWSGNLV TNATWRDLWL NEGFTTYVEN
RIMEDLYGRD RALMEQTIGY SELLAELAEL PASDSVLHID LGDRDPDDAF SGVPYVKGQL
FLRFLEQKFG RERFDTFVKS YFDHFAFQSI TTEQFRSYLT QQLLQKYPNI VSESEVDTWV
EGQGLPSFLV PPNSHAFDDI DAQRQAWLEG KRAASSLNTQ GWTVHQWLRF INEMPRLNLT
EQQLAELDKA FHFTGTHNNE IAFAWYALAL DNGYYSVLPA LKQHLTEIGR RRLIVPLYQK
LASSEHYDWA KTVYLAARSG YHPQTQASLD MMFSDKLMEH AH