| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2452 |
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| Symbol | |
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| ID | 4477329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2940208 |
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| End bp | 2941155 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639727050 |
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| Product | dihydrouridine synthase, DuS |
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| Protein accession | YP_870087 |
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| Protein GI | 117920895 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.334795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGTAA TTTTGGCTCC GATGGAAGGC GTGGTTGACG ACTTAATGCG AGATATTTTG
TCCTCAATTA ACCCCTACGA TTTGCTCGTC ACCGAATTTG TGCGCGTGGT TGACCAACTC
TTACCCGAAA AAGTGTTCCT CAAACTCTGC CCCGAACTGC TCAATGGCGG CTTTACCCCT
TCGGGCACGC CGGTTCGCGT ACAGCTTTTA GGGCAAGAGC CCAACTGCAT GGCCGAAAAC
GCAATGCGCG CGATTGAGCT TGGCTCCCAC GGCGTCGATG CTAACTTTGG TTGCCCCGCT
AAGATGGTGA ACCGCAGTAA TGGCGGCGCG GTGTTGCTGC AATACCCTAA TACGATTCAC
GATATTGTGC GCGCCATGCG CCAAGCCGTG CCCGCCGAGC ATCCGGTGAC GGCGAAGATT
CGTTTAGGTT ACGAAGACAA ATCCCTGTTT ATGGAGAATG CGCTAGCCGT TTATGAAGCG
GGCGCGACTG AGCTGGCTAT CCATGCCCGC AGTAAGGTCG ATGGTTATAA ACCTCCCGCC
TACTGGGAAT ACATCACCGA AGTGCGCGAG CGTTTGCCCA TTCCAGTCAT TGCCAATGGT
GAGATTTGGA ACCGCGAGGA TGCAAAGCGT TGTATGGCGG TGACGGGCTG CGACAGCATT
ATGATTGGCC GCGGCGCCAT TTCGCTGCCC AATCTTGCCG ATACCATTAA GACTGGCGCG
GCCCCCTACA GCTGGGCCGA CACCTTAGGC TTGATGCTAA GCTACACCCA ACGTGAACTG
AGCGGCCGTA AGAGTGATTA TTATCCGGCG CGAATTAAGC AGTGGTTTAG TTACTTAAAT
CGCCAATACC CCGAGGCGGA CACCCTGTTT AGGGAGCTGC GCATCTATAA GACCACTGAG
GAAATTGTGC GAGTGCTGGA AGAGGCACAG CAGCGCCTTG GCGAGTAA
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| Protein sequence | MRVILAPMEG VVDDLMRDIL SSINPYDLLV TEFVRVVDQL LPEKVFLKLC PELLNGGFTP
SGTPVRVQLL GQEPNCMAEN AMRAIELGSH GVDANFGCPA KMVNRSNGGA VLLQYPNTIH
DIVRAMRQAV PAEHPVTAKI RLGYEDKSLF MENALAVYEA GATELAIHAR SKVDGYKPPA
YWEYITEVRE RLPIPVIANG EIWNREDAKR CMAVTGCDSI MIGRGAISLP NLADTIKTGA
APYSWADTLG LMLSYTQREL SGRKSDYYPA RIKQWFSYLN RQYPEADTLF RELRIYKTTE
EIVRVLEEAQ QRLGE
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