Gene Shewana3_2450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2450 
Symbol 
ID4477327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2938533 
End bp2939372 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content48% 
IMG OID639727048 
Producthypothetical protein 
Protein accessionYP_870085 
Protein GI117920893 
COG category[S] Function unknown 
COG ID[COG3220] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00881658 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAGA GTGGATTGGT TGGATTAGGC TTACGGCGTG AAATGCTCAG TGAGTTTTGC 
CAAGCGCTGC CAACGGCTAT CGATTTTTTA GAGGTCGCCC CTGAAAACTG GATGACGCTC
GGTGGAAAAT ACGGTAAGCA ATTTAGGCAG CTTACTGAGC AACACACTTT TTTCTGCCAT
GGTCTGTCAC TCTCTATCGG CAGTCCTGCC CCTTTAGATT TGGCGTTTGT CCGCCAAGTG
AAGGCGTTTA TGGATCTGCA CCAAATCGAT GTTTATTCGG AGCATTTAAG TTATTGCTCG
GGTGGCGGTC ATTTATACGA TCTTATGCCC ATCCCCTTTA CCGATGACGC CGTTAAGCAT
GTGGCGACGC GGGTAAAACA AGTGGAGGAT ATTTTAGAGC GGCCTTTGAT CCTCGAGAAT
ATTTCCTTTT ATGCCGCGCC GAGCGCACAA ATGAGTGAGC AGGCGTTTTT AACCGCAGTG
TTAGAAGAGG CCGACTGTAA GCTACTGTTA GATGTGAATA ATATCTATGT GAACTCGATA
AATCATCAAT ACGATGCCGA GGGTTATTTA AAGGCCATGC CAACGGAGCG CATCGCCTAT
TTGCATATTG CGGGGCATTA CCAACAGTCT GAAACCTTGT TGATCGACAC CCATGGCAGC
GACATCAACG ACCCAGTCTG GGCATTGTTG GATAAGTGTT ATGCCCAGCA TGGCGTCTTG
CCGACGCTGC TCGAGCGTGA CTTTAATCTG CCTGAAACGG TGCAGTTATT GGATGAGATT
AACCAAATCC ATGCCTATCA AGCGCGGGCG AAAAATCGTT TGGATAAGAG GATTGCCTGA
 
Protein sequence
MQESGLVGLG LRREMLSEFC QALPTAIDFL EVAPENWMTL GGKYGKQFRQ LTEQHTFFCH 
GLSLSIGSPA PLDLAFVRQV KAFMDLHQID VYSEHLSYCS GGGHLYDLMP IPFTDDAVKH
VATRVKQVED ILERPLILEN ISFYAAPSAQ MSEQAFLTAV LEEADCKLLL DVNNIYVNSI
NHQYDAEGYL KAMPTERIAY LHIAGHYQQS ETLLIDTHGS DINDPVWALL DKCYAQHGVL
PTLLERDFNL PETVQLLDEI NQIHAYQARA KNRLDKRIA