| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2435 |
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| Symbol | |
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| ID | 4477244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2919485 |
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| End bp | 2921665 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639727033 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_870070 |
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| Protein GI | 117920878 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.718837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.768568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGTGTAT CAGCTCTGAA TATTGCCCAT CTAAAGTTAG CCACCTTTCT CGGCCTAGTG
GGTTTAGTGC TCAACATCTA CCCTATTCCA CTTTTTGCCA ACGTCCAGCT TATTTTAGGC
AACGCGGCGG TGGTGATTGT TGCCATCTTA CTCGGGCCTT GGTATGCCCT GTTTACTGCC
CTATTTACGG CAACGGGTTT GATGTTAGCT TGGTCTAGTG CCCACGTGTA TCTGGTGTTT
TTGCTTGAGG CGCTGTGGTT GGGGTTTGCG CGGCGCAGAG ATTTCCCCAT ACTCTACGCC
AGCATTTGTT ATTGGCTGTT GTTAGGCTTG CCATTAATGG GCTTATACCT GTGGTTAATC
ACGGGGATGC CGACTTACCA CATTCCCTTT ACCACGGTAA AACAAGCTTT TAATGGCATT
TTCTACACTA CCTTAGGTGA GCTTTGTGTG GTGGCACTCC CCAGTTTGTG GCACTTAAAA
GATAAGCTGG TAAACCATAC TCGCCGCACC ATGAGTGCGC AGCTTAGCTA TCTGTTTATT
TTGATTACCA CCATCAGCTT ACTGACCTCA TCCCTCGTGT TTAATCATTA TTTTATGGAT
AAACAACAGG TGTTGATTAA TCAAAACCTC AATGACACAG GGATCTCCCT TGGCCACGCC
ACCGAAACTT ATATCAGCAC TAACACCCGT ACTATTGCCA GCATAGGTAA ATTTATCAGC
GTATCGGGTT TGCCATTCGA ACAATGGCAA CTCGTCCTCG ATAGTGTTCA AGGGTTAACC
CCCAGTTTTA CGACTATGTT TATCGCCAAT GAAGATGGCG ACATAGTGGC GGGCAGCCCA
CTTGAGAAAC TTAACCAAGT TAGGCTGTTA CCACAAAAAG TAAATGTGCT AGATAGGGAT
TACTTTATCC AAGCTTTTAT TCACCATAAC ACCTTTGTCT CGCCAGTATT TATTGGCCGT
GGGCTCGGCA AGGACATCAT CATCGCCATC AGTGCCCCTA TCTTTAAAGA AGAGTCTAAA
ACTGCGATTG GTATTGTTGA GGGCAGCCTC GATTTAAGTT ACTTCTCCAA TATTGACAAG
CAAAATCAAC ACCATGAGAC ACAATCCATT ATCTTATTGG ATGAGAAGAA AAATATTGTT
TACGCCTCGG AAAGGCTCGG GCTACAACCC TTAACCCCTT TCAACTATGT CACGGGTAGC
ACTGAGTATC GCACGCGATT ACAGCTGATG AATATCAATC AGGAGGATAC CGAAACGCCT
GAATATATTT ACGCCCACCA TAAACTCAAA AATGGTTGGC ATTTGTATGT GGTTGAGCCG
TTTATCCCTC TGCTTACCTT AGCCCAAGAG CAATATACTA AGACCATAGT GCTACTGTTA
CTCAGTATGG TCGGCGCCAT TATTATCGCC AAAGCAATCA GCCGTTTAAC GACTACTCCC
CTCGCCTTAC TGGCGCAACA TTTTAGCCAA AAGAAAGACG GCAGTATCAA TGAGGAAAAA
TTTGAACACG AGCTACTCGA TAACAGTACG CCAAAGGAAA TCTATAGCCT GTACGAGAGC
TTAGAAGCCA ATCAGCAAGT GCTGCTTAGC CATCAACTCG AGTTAGAAGA TAAAGTAAAA
CAGCGCACTA TGGATTTAGA AATCGCTAAC CGCAAACTCA AGGATATGGC CGAGCGGGAT
TCCCTCACCA ATTTGTACAA TCGACGTTAT ACCGAAAAGC AATTCCTGAA AATTCAAGAC
TTGTGTGAGC GAGGCCAAGA TGCCATTGCC GTAGTATTGC TCGACCTCGA CTTCTTTAAA
AAAGTGAATG ACACCTACGG CCATCTGGCG GGCGATGAAT GCCTACGGGT GATGGCTGAA
GTGTTAACGA GTCACTTTAA GCGTGATGTC GATTTGCTGT GTCGTTATGG CGGCGAAGAG
TTCGTCTTGA TATTACCTAT GTGTAATACC TTGAAAGTTG AGCAACATCT TAATGGCTTC
CGCGAAAAGC TCGCCAGCGT GGTGATTACG AACCCAGCCG ATCAAGTCAC TTTTAGTGTC
ACAGTCAGCA TAGGCGCCAT CATTGCCGAT GCCGCTTACA GCTCAACGCT TGAAGTTTGG
TTAAAACAAG CGGATGAGAA CCTCTATAAA GCTAAGGAAC AAGGGCGCAA CTGCGTGGTT
TGCACCCTAG TCACAGTTTA A
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| Protein sequence | MRVSALNIAH LKLATFLGLV GLVLNIYPIP LFANVQLILG NAAVVIVAIL LGPWYALFTA
LFTATGLMLA WSSAHVYLVF LLEALWLGFA RRRDFPILYA SICYWLLLGL PLMGLYLWLI
TGMPTYHIPF TTVKQAFNGI FYTTLGELCV VALPSLWHLK DKLVNHTRRT MSAQLSYLFI
LITTISLLTS SLVFNHYFMD KQQVLINQNL NDTGISLGHA TETYISTNTR TIASIGKFIS
VSGLPFEQWQ LVLDSVQGLT PSFTTMFIAN EDGDIVAGSP LEKLNQVRLL PQKVNVLDRD
YFIQAFIHHN TFVSPVFIGR GLGKDIIIAI SAPIFKEESK TAIGIVEGSL DLSYFSNIDK
QNQHHETQSI ILLDEKKNIV YASERLGLQP LTPFNYVTGS TEYRTRLQLM NINQEDTETP
EYIYAHHKLK NGWHLYVVEP FIPLLTLAQE QYTKTIVLLL LSMVGAIIIA KAISRLTTTP
LALLAQHFSQ KKDGSINEEK FEHELLDNST PKEIYSLYES LEANQQVLLS HQLELEDKVK
QRTMDLEIAN RKLKDMAERD SLTNLYNRRY TEKQFLKIQD LCERGQDAIA VVLLDLDFFK
KVNDTYGHLA GDECLRVMAE VLTSHFKRDV DLLCRYGGEE FVLILPMCNT LKVEQHLNGF
REKLASVVIT NPADQVTFSV TVSIGAIIAD AAYSSTLEVW LKQADENLYK AKEQGRNCVV
CTLVTV
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