Gene Shewana3_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2429 
Symbol 
ID4477237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2912312 
End bp2913424 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content52% 
IMG OID639727026 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_870064 
Protein GI117920872 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.786429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC TATTTTCTCC TTTCAGATTA AAAGATATCA CGCTTAAAAA CCGCATTGCC 
GTGGCACCTA TGTGTCAGTA TCAGGCTCAC GACGGGCTGA GTAACGATTG GCATCAAGTA
CATTACACTA GTCTCGCTCG CGGCGGCGCA GGTTTAGTGG TGGTTGAGGC GACGGCCGTA
TCGCCTGAGG GACGGATCAC CCCGCGCTGC TTAGGATTGT GGAACGAGGA ACAAGCGGCA
GGTTTGGCCA ACATCGCCTC GGCGATTAAA GGTGCTGGCG CGGTGGCGGG GATCCAAATC
GCCCATGCTG GTCGTAAAGC CAGTGCCAAC ATTCCTTGGG AAGGGGATGA CCATATTGAA
GGTGACGAAG GATGGCAAAC GCTTTCGCCA TCGGCCGTGG CATTTGGTGC TAACCTTGGC
AAAGTACCAA CAGCCATGAC GATTGACGAT ATTCAACGTG TGAAAGCCGA TTTCGTTGCA
GCGGCCAAGC GGGCGCTCGA GGCAGGGTTT GAATGGTTAG AGTTGCACTT TGCCCACGGT
TATTTAGCGC AAAGCTTCTT CTCGACCTAT GCCAACCAAC GTACCGATGA ATACGGTGGT
GATGCACAAG GGCGAGGCCG TTTTCTTATC GAGACGGTTG AGGCGGTGAG GGCGGTTTGG
CCTGAACATT TACCGTTAAC GGCGCGCTTT GGGGTGATTG AATTTGATGA TAAAGACGAG
CAAACCCTGA GTGAGTCCAT CGCCTTGGTG AAGCAATTTA AGCGCGCTGG TCTCGATATG
CTTAACGTCA GTATTTGTTT TTCAACACCT ACGGCCAATA TTCCATGGCG CCCGGCTTTT
TTGGCGCCTA TTGCCGAGCG AGTGCGTCGT GAAGTGGGTT TCCCGGTGGC AACGTCATGG
GGCATGGATA ATCCTCACCA CGCAGAGCAA GCGATTCAAG ATCAGCAAAT GGATTTAGTC
ATGATAGGTA AAGCGTTCTT GGCTAACCCT CACTGGCCGT ATCAAGCGGC ACAAACCTTA
AAGGTTTCGC GTCCATCTTG GGTGTTACCT TCATCCTACG CCCATTGGTT AGAGCGTTAT
TCCACCGTGA AGGCGGAATC ATCCATAGAT TGA
 
Protein sequence
MTQLFSPFRL KDITLKNRIA VAPMCQYQAH DGLSNDWHQV HYTSLARGGA GLVVVEATAV 
SPEGRITPRC LGLWNEEQAA GLANIASAIK GAGAVAGIQI AHAGRKASAN IPWEGDDHIE
GDEGWQTLSP SAVAFGANLG KVPTAMTIDD IQRVKADFVA AAKRALEAGF EWLELHFAHG
YLAQSFFSTY ANQRTDEYGG DAQGRGRFLI ETVEAVRAVW PEHLPLTARF GVIEFDDKDE
QTLSESIALV KQFKRAGLDM LNVSICFSTP TANIPWRPAF LAPIAERVRR EVGFPVATSW
GMDNPHHAEQ AIQDQQMDLV MIGKAFLANP HWPYQAAQTL KVSRPSWVLP SSYAHWLERY
STVKAESSID