Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2425 |
Symbol | |
ID | 4477233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2907852 |
End bp | 2908853 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639727022 |
Product | di-haem cytochrome c peroxidase |
Protein accession | YP_870060 |
Protein GI | 117920868 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1858] Cytochrome c peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.370104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAAC TCACCGCTAT CGCGATCAGT ATTATGGCCA TGTTAGGCGG GCACTACGCC GTTGCTGCCG AACCGATTGA AGTGATTACG CCTGCTAAAA TCACTGAGCC AGAAAAAGTC GAGCTGGGTA AGATGCTGTT TTTCGAACCT AGACTGTCGA AATCAGGCTT TATCTCCTGT AATTCTTGCC ACAATCTTTC CACCGGTGGC GTGGATGCCC TACCTACATC GATTGGCCAC CATTGGCAAG AGGGTCCAAT TAACTCCCCA ACCGTGCTGA ACGCCGACTT TATGCTGGCG CAATTCTGGG ATGGCCGTGC CAGCGACTTA AAAGAACAGG CCGCGGGTCC GATTGCCAAT CCGAAGGAAA TGGGCTTTAC CCATGAGCTG GCCACCGAAA CCATTGCCTC AATGCCCGCA TACCGTGCTC GCTTTGCTAA GGTCTACGGT GATGACAAAG TCGATATCGA TCGTTTAACC GATGCCATTG CCGCCTTCGA AAAAACCTTA GTCACACCGA ATAGCCCCTT CGATCAATAT TTATTGGGTA AACAGGATGC GATTAGCAGC GAAGCCAAAG CGGGTTACCA ACTGTTTAAG GACAAAGGCT GCGTCAGTTG CCACAACGGC CCTGCGGTCG GTGGCACTAT GTTTATGAAG ATGGGCTTAA TCAAACCGTT CCACACCAAT AATCCTGCCG AAGGGCGTAA AGGCGTGACG GGCAAAGAAG CCGATAAATA TGTGTTTAAA GTACCGACGC TGCGTAATAT CGAGCTCACC TATCCCTACT TCCACGATGG CAGCGTATGG ACGCTCGAAG AAGCGGTCAA TACCATGGCA GATATTCAGT TAGGGCAAAA GCTTACCGAC AAGGAAACCA AGGAAATGGT GTCGTTTTTA AATTCACTCA CAGGTGAACA GCCGCAGATC ACTCTGCCAA TTCTGCCGCC ATCGAATAAA GCGACGCCGC GCCCTGTACC ATTTGCAGCA GCAACCAAGT AA
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Protein sequence | MIKLTAIAIS IMAMLGGHYA VAAEPIEVIT PAKITEPEKV ELGKMLFFEP RLSKSGFISC NSCHNLSTGG VDALPTSIGH HWQEGPINSP TVLNADFMLA QFWDGRASDL KEQAAGPIAN PKEMGFTHEL ATETIASMPA YRARFAKVYG DDKVDIDRLT DAIAAFEKTL VTPNSPFDQY LLGKQDAISS EAKAGYQLFK DKGCVSCHNG PAVGGTMFMK MGLIKPFHTN NPAEGRKGVT GKEADKYVFK VPTLRNIELT YPYFHDGSVW TLEEAVNTMA DIQLGQKLTD KETKEMVSFL NSLTGEQPQI TLPILPPSNK ATPRPVPFAA ATK
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