Gene Shewana3_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2417 
Symbol 
ID4477225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2898752 
End bp2900914 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content47% 
IMG OID639727014 
Productpolyphosphate kinase 
Protein accessionYP_870052 
Protein GI117920860 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0855] Polyphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.136643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCCGA ATACCGATAA ACTGTCGATC GATAAAGAAA TCTCTTGGTT GTCATTCAAC 
GAGCGGGTGC TGCAGGAGGC CTGTGATCCC AATGTGCCTA TCGTGGAGCG GGTGCGCTTT
TTAGGCATAT TCTCCAATAA TATGGATGAG TTCTTTCGGG TGCGGGTGGC CGCGGTCAGA
CGTTCAATTC TACTCTCCGC GTTGCAGGAA GGTCGCAGCA ATAGCCGTCA CCTCATGGCC
AAAATTCAAA CTAAAGTGAT GGCATTGCAG GAGCGTTTCG ATAGCATTTA CGTCGAACTG
ATGCGTGAGT TAGTCCGTCG CAACATTTTG TTAATTAACG AAAAACAATT AAGTGAGTTC
CACAGTAACT GGCTTAAAAA ACATTTTCGC GATCATTTTA AACGCCATAT CGCGCCGCTT
ATCGTTAACA ACAATCGCGA TTTAGTAAAG CATATCAACG ACGACGCCAC TTATCTGTGT
GTGTGTTTGT TCACTAAATC CCGCAGACAA TATGCCCTCG TGGAAGTGCC CACCAAAAAT
GTGCCGCGTT TTATTGAGTT ACCCGCCGAA AAATCGAAGG CGAAAAAATA CTTAATCCTG
CTGGATAATA TTATTCGCCA CTGTGTGGAC GATCTCTTTG GTCCCTTCTT CGAGTACGAT
GCGATTGAAG TCTATTCGAT GAAGCTGACT CGCGACGCCG AGTTCGATAT TACCGACGAA
CTTGAACAAA CCCAGCTTGA AAAAATGACC AAGGGTTTGA AAAAACGCCT GACCGCCGAA
CCCGTGCGTT TGGTGTACGA CAAAGAAATG CCCGAGCATA TGCTTGAAAT GCTAAAGGAA
AATTTAAACA TCAGCTCGAC TGAATGTTTG ATCCCCGGCG GGCGCTACCA CAGCTTCAAA
GACTTTATCG GCTTCCCTAA CCCTAGCCGT GATTACCTCG AAAACGAGAA ATTGCCCGCG
CTCAATAGCT CGGGCTTTGG TCGCAGCGCC AACAGTTTCG ATGCGATCAA GATGGGCGAT
ATTATGGTCA ACTATCCGTA CCATAAGTTT TCCCACTTTA CCGAAATGGT GCGTCAGGCC
GCCTACGATC CTGCTGTGCG TTTTATTCGC ATCAACCTTT ACCGTGTCGC GAAAAAATCC
CATGTGATGC AATCGCTTAT CGATGCGGTG AAAAATGGTA AACAAGTCAC CGCCGTGATT
GAGCTACGGG CACGCTTTGA CGAGCAATCT AATATTGAGT GGACACGGGT GCTCGCCGAG
GCGGGCGTGA AAGTCCACCA TGGGATCACC AGCTTAAAAG TACACTCAAA GTTGTGTTTG
ATTGGCCGCG AAGAGCAAGG CGAGATGAAG CTCTATTGCC ACGTAGGTTC AGGCAACTTT
AACGAAGGCA CGGCGCGGGT CTATACCGAC TTATCGCTGT TTACCGCCAA TCAGGAAATC
GCCCGCGAAG TGGAGCAAGT GTTTGACCTG ATTGAACATC CATACCGCCG CGATAACTTC
CAGCATTTGA TTGTGTCGCC CTATGATGCG AGACAAAAAC TGACCCATTT GATTGATAAC
GAAATCGTCA ATGCCCAGAG CCATATTAAG GCGGCGATTA CCTTAAAATT GAATAACCTG
CTAGATGAAT CCTTAGTCCA AAAACTTTAT GAGGCCTCGG CTGCGGGGGT CAAAATCAAA
CTGTTGATCC GCGGTATGTG CTCGCTGATT CCACAAATTC CGGGGATCAG CGACAACATC
GAGATTTACA GTATTGTCGA CCGATTTTTA GAACATTCAC GGGTGATGCT GTTCCATGCC
GGTGGTGAGA ATAAATTATT TATCAGCTCC GCCGATTGGA TGAGCCGCAA CATAGATAAC
CGCGTCGAAG TGAGTGTGCC TATTTATGAT CCGCGTCTAA AACAAATGGT GATGGATATT
TTATCGTTAC AGTTCAATGA CAACACTAAG GCGCGCATCA TCAATAAGGA ACAGAGCAAT
CCTTATCGTA ACCGCGGTAA TAAACGTAAA GTGCGTTCTC AAATTGCCAT TTATCAATAT
CTGATTAATT ATGAGAAGCG ATTGCAGCAA GAATTTAGCA CCCAGCGCGA AGCCGCAAAG
CTTGAAGCGG AGCACGCGGC GGAACTTGCC CACAATCTCG AATTACAGGC CAAAGCCAGC
TAA
 
Protein sequence
MSPNTDKLSI DKEISWLSFN ERVLQEACDP NVPIVERVRF LGIFSNNMDE FFRVRVAAVR 
RSILLSALQE GRSNSRHLMA KIQTKVMALQ ERFDSIYVEL MRELVRRNIL LINEKQLSEF
HSNWLKKHFR DHFKRHIAPL IVNNNRDLVK HINDDATYLC VCLFTKSRRQ YALVEVPTKN
VPRFIELPAE KSKAKKYLIL LDNIIRHCVD DLFGPFFEYD AIEVYSMKLT RDAEFDITDE
LEQTQLEKMT KGLKKRLTAE PVRLVYDKEM PEHMLEMLKE NLNISSTECL IPGGRYHSFK
DFIGFPNPSR DYLENEKLPA LNSSGFGRSA NSFDAIKMGD IMVNYPYHKF SHFTEMVRQA
AYDPAVRFIR INLYRVAKKS HVMQSLIDAV KNGKQVTAVI ELRARFDEQS NIEWTRVLAE
AGVKVHHGIT SLKVHSKLCL IGREEQGEMK LYCHVGSGNF NEGTARVYTD LSLFTANQEI
AREVEQVFDL IEHPYRRDNF QHLIVSPYDA RQKLTHLIDN EIVNAQSHIK AAITLKLNNL
LDESLVQKLY EASAAGVKIK LLIRGMCSLI PQIPGISDNI EIYSIVDRFL EHSRVMLFHA
GGENKLFISS ADWMSRNIDN RVEVSVPIYD PRLKQMVMDI LSLQFNDNTK ARIINKEQSN
PYRNRGNKRK VRSQIAIYQY LINYEKRLQQ EFSTQREAAK LEAEHAAELA HNLELQAKAS