| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2414 |
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| Symbol | |
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| ID | 4477222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2895136 |
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| End bp | 2896335 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639727011 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_870049 |
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| Protein GI | 117920857 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.347428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATA AACATCAGCT AGCCACCCAA ATCGTCAGCG TCGGTCGAGA TAAAAAATGG
ACCAAGGGCG TGATTAACCC GCCCGTATTT CGCGCATCCA CTATCGTCTT CGACACCATG
GAAGACATGC GTCACGCCGC TAAAAACAAA ACCAATGGCG AAATGTTTTA TGGCCGCCGC
GGCACCCCAA CCCATTTTGC GTTTCAGGCG GCGATCAGTG AGCTCGAAGG TGGCGCAGGT
ACGGCGCTTT ATCCCTCGGG TGCGGCAGCG ATTAGCGCGG CTTTGTTATC GTTTTTACAG
GCGGGCGATC ACCTCTTGAT GGTCGACAGT GTTTACGAGC CAACGCGAGA TCTCTGTAGC
CATATTCTGG CGGGCTTTAA TATTGAGACC ACCTATTACG ATCCGCTAAT TGGTGAAGGC
ATCCGCGAGC TTATTCGCCC CAATACTAAG GTGCTATTTT TAGAGTCTCC CGGCTCCATC
ACCATGGAAG TGCAGGACGT CCCAACCCTA TGCCGTATCG CCCATGAACA TGGATTGGTG
ACTATTCTCG ACAACACTTG GGCGTCGCCA ATCAATAGCA AGCCCTTCGA GATGGGTGTC
GATGTGTCGA TTCAAGCCGC GACCAAATAT ATCGTCGGTC ACTCTGATGT GATGATAGGC
ACCGCGACCG CCAACGAGAA GCACTGGCCG CAGCTGCGTG AGCGCAGTTA TTTATTGGGG
CAAACCACCT CCCCCGACGA TGTGTATCTC GCTACGCGCG GATTACGCAC CCTAGGCGTG
CGCATGGCGC AGCATGAGAA AAATGCCCTT AAAGTAGCTA ACTGGTTGAA AACGCGCCCC
GAGGTTGATC ATTTACGTCA CCCCGCCTTT GATACCTGCC CTGGACATGA ATTCTTTAAA
CGCGACTTTA GCGCCGCCAA CGGCCTGTTC TCCTTCGTGT TAAAGCAAGG GGATCAAGAA
GCGGTCACCG CCCTCGTTGA AAATATGCAG CATTTTAAAA TGGGGTTTTC GTGGGGCGGT
TATGAGAGTC TGATCCTAGG GATTTTCGGG ATTGAAAAAA TCCGCAGTGC CACTCAGTGG
GATGCACGCA AGCCGTTGAT CCGTGTGCAT ATTGGCCTAG AAGATCCCGA TGATTTAATT
GCCGATCTCA GCGCGGGCTT TGAGCGCTTT AATGCCGTAC TCGCCACCAA GGCCAAATAA
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| Protein sequence | MTDKHQLATQ IVSVGRDKKW TKGVINPPVF RASTIVFDTM EDMRHAAKNK TNGEMFYGRR
GTPTHFAFQA AISELEGGAG TALYPSGAAA ISAALLSFLQ AGDHLLMVDS VYEPTRDLCS
HILAGFNIET TYYDPLIGEG IRELIRPNTK VLFLESPGSI TMEVQDVPTL CRIAHEHGLV
TILDNTWASP INSKPFEMGV DVSIQAATKY IVGHSDVMIG TATANEKHWP QLRERSYLLG
QTTSPDDVYL ATRGLRTLGV RMAQHEKNAL KVANWLKTRP EVDHLRHPAF DTCPGHEFFK
RDFSAANGLF SFVLKQGDQE AVTALVENMQ HFKMGFSWGG YESLILGIFG IEKIRSATQW
DARKPLIRVH IGLEDPDDLI ADLSAGFERF NAVLATKAK
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