Gene Shewana3_2410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2410 
Symbol 
ID4477218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2888800 
End bp2891055 
Gene Length2256 bp 
Protein Length751 aa 
Translation table11 
GC content53% 
IMG OID639727007 
Productvault protein inter-alpha-trypsin subunit 
Protein accessionYP_870045 
Protein GI117920853 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID[TIGR01167] LPXTG-motif cell wall anchor domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.177672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACAG GGAAAAGGGT AAAAGAAGTT TGTCAAACAC TGGCGATGCT AGTGATCGGC 
GCCTCCATTT GTTGGGGGCT ACCATTTGCG GTGTTAGCCT CACCGAACAG TGTGGGCACC
TTATCGGCGC CACAAAATAT TGCCGCGACC TTCGATGAAC ACACTGCGAG CATATTGCCA
GCGTTTAGTT TCGACGATGT CACCCAAGGG ATGCTGGTGT ATCAAACCGC CAGCGGCCGT
TTAATGCCGT CCTTACCCGT GGACACGCAA GTGTCGATGC AGGTCTCGGG GCTGACCAAT
AGGGTGAGCG TAAAGCAGGT TTTCAGTAAT CAAACGGGAT TTGTCCTCAA TGGCCGTTAT
CTGTTCCCTT TACCCAATGA GGCGGCTGTG GACTCACTGC GTTTGCACAT TGGTGAGCGG
ATCATCGAAG GCCAAATTCA CCCAAAACAG CAAGCAAAAC AGATTTTTGA GCAGGCCAAA
TCCGAAGGGA AGCGTGCCAG TCTAGTCAGC CAAGAACGGC CCAATATGTT CACGACCGAA
GTCGCTAACC TCGCTCCCGA TGAGGAGTTG GTGGTCGAAA TCAGCTATCA AGAAACCATT
CATTATGAAG ATGGTCTCTT TAGCCTACGT TTTCCGCTGG TGGTGGCGCC GCGCTATATC
CCTGGCTTAA CGCTAGGCGG AAACAATGGT GAGCGCGTGA CCAGCAGCCA AGTCTTCGAT
GCCGACCGGA TTATTGCCCC GATCCGTGAT GCCAATAGCG AGGCGGATCC CGTACTCAAG
GCCGATATTA AGGTCAAACT CGGTGAAGGC GTGGACAAAT CCGCCGTGGT GAGTCCGTAT
CATCCCATTA CGATTGATGA AAAACAGGGC CAACTGACGG TGGCCTTGGC TAATCGCGTG
CCTGCCAATC GTGACTTTGT GCTGCAATGG CGTCTTAAGC AGGGCACCAG TCCCGTGGGT
TGGGTATTCA ACCAAGCGGG CAAAACCCAT GTGTCGCAGG ACGATAATGC GAGTGCGGAT
ACAGGTCCAA CTGGTAAAAG TAGCAATACA GATAACTACA GCTTAGTGAT GGTCCTGCCG
CCCAAAGTCG AGGCCAGTGA ACAACTGAAC TTGCCCCGAG AGCTTATTTT AGTGATTGAT
ACTTCGGGGT CGATGGCGGG AGACTCTATC ATTCAGGCGA AAAATGCCCT GCGTTATGCG
CTGCGCGGTT TAAGGCCACA GGACAGTTTT AACATTATCG AATTTAACTC TGATGTGTCT
TTACTATCGC CAACACCATT GCCCGCAACC GCGAGTAATC TTGCTATGGC ACGTCAGTTT
GTGAATCGTT TGCAGGCCGA TGGCGGCACC GAAATGGCGC AGGCTTTAAA TGCCGCGCTG
CCAAGACAGG CGTTTAACGC AGCGTCGGCT GAGGATAAGT CGCTAAGACA AGTGATCTTT
ATGACTGATG GCTCAGTCGG CAATGAGTCG GCGTTATTTG AGTTAATCCG CAATCAAATC
GGCGACAACC GTCTTTTTAC CGTCGGCATT GGCTCGGCGC CAAACTCGCA TTTTATGCAG
CGTGCGGCTG AACTTGGGCG CGGTACTTTT ACTTACATTG GTGATGTGGA TGAAGTGGAG
CAAAAGATCA GCCAGTTGCT AGCCAAAATC CAGTATCCGG TACTGACCGA TTTGCAGGTG
CGTTTTGACG ATGGTTCTGT GCCTGATTAC TGGCCCGCAC CTATACCCGA TCTTTACCGT
GGTGAGCCGG TATTGATCAG CCTAAAGCGC CATCCTCGTG AGCCTCAGGA ACTGGTGATC
TCCGGTCGTC AGGGCCATAA AAACTGGCAA CAGTCGTTAT CTTTGCAAGC CAATGTCGCA
ACTGATGTAG CGCAATCCTC AGCGGGACTC GATTTACTCT GGGCGCGCAA ACAGATTGCG
GCCTTAGAGC TGAGTAAAAA CGGCGCTAAC GATGACAAGG TCAAACAACA GGTCACGGCG
CTGTCGCTCA ACTATCACTT AGTCAGCCCT TATACCAGCT TGGTCGCGGT GGATTTAACC
CCTATCGCCA GCAATGCCAT GAGCCGCGAT GCGGTGGTGC GCCAGCATTT ACCCTTGGGT
TGGCAGCCAA TGGGCGTTTT GCCACAAACA TCGACCTCGA GCCGTTTCGA CATGCTCTTA
GGGGGCAGCG TGTTACTGCT TGCCTTGATG TTGGCACTGT CGATTCGTCG CCAGCAGCGG
CAGCAACGCG CGCTGTCATT CGCGCTGAAC GGCTGA
 
Protein sequence
MITGKRVKEV CQTLAMLVIG ASICWGLPFA VLASPNSVGT LSAPQNIAAT FDEHTASILP 
AFSFDDVTQG MLVYQTASGR LMPSLPVDTQ VSMQVSGLTN RVSVKQVFSN QTGFVLNGRY
LFPLPNEAAV DSLRLHIGER IIEGQIHPKQ QAKQIFEQAK SEGKRASLVS QERPNMFTTE
VANLAPDEEL VVEISYQETI HYEDGLFSLR FPLVVAPRYI PGLTLGGNNG ERVTSSQVFD
ADRIIAPIRD ANSEADPVLK ADIKVKLGEG VDKSAVVSPY HPITIDEKQG QLTVALANRV
PANRDFVLQW RLKQGTSPVG WVFNQAGKTH VSQDDNASAD TGPTGKSSNT DNYSLVMVLP
PKVEASEQLN LPRELILVID TSGSMAGDSI IQAKNALRYA LRGLRPQDSF NIIEFNSDVS
LLSPTPLPAT ASNLAMARQF VNRLQADGGT EMAQALNAAL PRQAFNAASA EDKSLRQVIF
MTDGSVGNES ALFELIRNQI GDNRLFTVGI GSAPNSHFMQ RAAELGRGTF TYIGDVDEVE
QKISQLLAKI QYPVLTDLQV RFDDGSVPDY WPAPIPDLYR GEPVLISLKR HPREPQELVI
SGRQGHKNWQ QSLSLQANVA TDVAQSSAGL DLLWARKQIA ALELSKNGAN DDKVKQQVTA
LSLNYHLVSP YTSLVAVDLT PIASNAMSRD AVVRQHLPLG WQPMGVLPQT STSSRFDMLL
GGSVLLLALM LALSIRRQQR QQRALSFALN G