| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2409 |
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| Symbol | |
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| ID | 4477217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2888107 |
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| End bp | 2888700 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639727006 |
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| Product | sortase family protein |
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| Protein accession | YP_870044 |
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| Protein GI | 117920852 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0892648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCGA AAGCACACTT TGCCCAATAT TTGATTGAAC AAGCCTGGGC TAAAACCTTA
ATCGATGGTC AATCCCATAA GCCTTGGTCC TGGGCCGATA CCTATCCCGT GGCTAAGCTC
TCCATCGAGC AGGCCAAAAG ACCGAATCAC TTCGATGGTC CGGCATCCAA CGACAGCTTA
TATGTGCTGG CGGGCGCATC AGGTCGTAAT TTGGCCTTCG GGCCAGCCTT AGTGTTATCG
AGTGCCCCCG CTGGCGCGCA AGGTAATACT GTGATTGCAG GGCACAGGGA TACGCATTTT
GCGATGTTAA ATGGCATCAG TGTTGGACGC CGCTTGGCGC TGCAAACCGC GACGGGCAAA
GAAATTGTTT ACCAAGTAGT CGCGACCGAA GTGGTGCACG AATCGCAAAC TGAGTTGATG
GCGCCAAGTG AGGATAATCG TTTAACCTTG ATCACTTGCT ATCCCTTCGA TGCGTTGCAA
GGTGGGGCGG AACTGCGTTT TGTGGTGCAG GCTTTTCCGA TCGAACCCGA GCCTGCTGCG
GTACAATCCG CTGAAACGAT GGCCACACAG GCGATGGTTC AAAAGGTGGC CTAG
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| Protein sequence | MQAKAHFAQY LIEQAWAKTL IDGQSHKPWS WADTYPVAKL SIEQAKRPNH FDGPASNDSL
YVLAGASGRN LAFGPALVLS SAPAGAQGNT VIAGHRDTHF AMLNGISVGR RLALQTATGK
EIVYQVVATE VVHESQTELM APSEDNRLTL ITCYPFDALQ GGAELRFVVQ AFPIEPEPAA
VQSAETMATQ AMVQKVA
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