| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2408 |
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| Symbol | |
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| ID | 4477216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2886847 |
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| End bp | 2887872 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639727005 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_870043 |
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| Protein GI | 117920851 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.62942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGAG ATTTATTACA AACCGCAGCC TTAAATCTTA AAAAAGCGGT TCCCTTAATG
CTCAAGCATC AAATTCCCAC CACGCCAATC AATTATGCCC TGTGGTATAC CTACGTGGGC
GAACAAAACC CAGCGTTAAA CGCACAGCTT GATACGGTTA TCGCCCACTA CAACACTTGC
CCGCCAGTCA GTAGCGAGTT GTTGTTTCGC CAGTATGTCG CCGATCCGGT TGAGTTGGAT
GTTCGCGATA TGCGGCTCAA CCTTGAGGCC ATGGCCACTG AGCTGTCGCA ATCGATTCGG
GATACCAATC TCGATGCAAC TGAGTTCCAG ACCTGTATTA ACACCAACTT TGCCAAACTC
AATGGCATTG AAGAAGGCGC GCTTAGCGTC GAGCAAGTGC TGGATTTAGT GCGTAATTTG
GTGAAAGAGT CCGAGAATAT TCGCTCGAGC ACTGAGTATT TCACTTCCCA GTTACAAAAA
GCACAGACTG AGATTGATGC GTTAAAACAA AAGCTTGAAA AATCAGAGAA AGATGTACTT
TACGATGCAC TCACGGGCTG TTTAAACCGC CGCGCCTTCG ACGCCGACCT CGCCGGCATG
TTGGCACAGG CCCCCGAGGG CACCTGTCTT ATCTTGGTCG ATATCGATCA CTTTAAAGCC
TTTAACGACA ACTATGGCCA CCAGCTGGGC GATCAAGTAT TAAAAGCTGT ATCAAAGCGT
TTGCAGGAAG CCTGTCGGGA TGGTTGTAAG TTGTACCGCT TCGGCGGCGA GGAGTTTGCG
ATTATCGTGC CGAAAAGCCA ACTGCGTATT GCGCGGCAAC TGGCCGAGGC CATGCGCCGT
GGGCTCGAGA AACTCAGCCT CAAGGATAGG CGCAAAGATC AACGTATCGA CAATATCACC
GCCTCCTTCG GTGTCGCCCA GTGGCAGGAA AAACAAGTGG CTATTCACCT CATCGAAAGA
GCGGATATGC TACTTTATGA AGCCAAACGC TTAGGTCGAA ATCGGGTGAT GCCGATGAGC
AACTAG
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| Protein sequence | MSRDLLQTAA LNLKKAVPLM LKHQIPTTPI NYALWYTYVG EQNPALNAQL DTVIAHYNTC
PPVSSELLFR QYVADPVELD VRDMRLNLEA MATELSQSIR DTNLDATEFQ TCINTNFAKL
NGIEEGALSV EQVLDLVRNL VKESENIRSS TEYFTSQLQK AQTEIDALKQ KLEKSEKDVL
YDALTGCLNR RAFDADLAGM LAQAPEGTCL ILVDIDHFKA FNDNYGHQLG DQVLKAVSKR
LQEACRDGCK LYRFGGEEFA IIVPKSQLRI ARQLAEAMRR GLEKLSLKDR RKDQRIDNIT
ASFGVAQWQE KQVAIHLIER ADMLLYEAKR LGRNRVMPMS N
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