Gene Shewana3_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2400 
Symbol 
ID4479635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2878568 
End bp2879590 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content45% 
IMG OID639726997 
Producthypothetical protein 
Protein accessionYP_870035 
Protein GI117920843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.607127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTCGACA GTCAACATGG ATTAATCCTT TGGAAGCAGC GTGTGCGGCA AGTCTTGACT 
GCGCCTAAAT GGCTTAAACA TCCATTCGTG ACGCTTAAGC AATTTTGGCA GAGCTTAAAT
GTTGCCCAGC GTTGTTACCT GTTCGCGTTA ATGGCGTTAA TGGTATTCCA ACCCGAAATT
TGGATCGCCG CCATCATCAC CGCTATTGCC TTGATTATTG AGTTTTGGCC CAAATTTGCC
ATGGCTTGGC ATACGCTGGC GGGGAAAGCC ATTTTCCTGC TGTTTTATGC CGTTATTGCT
AACTTTGCTT TAGCTGCGAG CGGCAGTGTG GTGAACGAAA TCACCGGTGT ATCGGCCTCA
CATTTGTCCT ACACCCATAA CTTTGCCATT TTGCTGTATC TGCCGATTTG GTTTGTGTGT
ATCTCCATCC TTGCCTTACT CCTGTTGCAA TTGGTGATCC CTTGTTATTT GTTTTTCCAT
ATCGGATTGC GGATTTTAGG ACTCGAAGCC AAGCAGCAAG GCAGTAAAAA ACGATTTGTG
GTGACAACCG CGCTGGTGCG TATGATTCTG TCTGTGGTGT TGTTATTAAA CTTGGTTGCG
ATTACCGATG GTGAAAACTG GGTAGGGGAT TTAGCCAAGA AAACCCAAGC GTTAAAACAT
GATTCGATAG ATAAAAGAGT GGTTAATGAA GGCGAAACCA TTCTCAAAGC CGAGGATAGT
ATTGAACAAG CGGGAACTGA ACTCACGCAG CAACCTAACC AAACTGACAC CACCGAGACA
CTTAAGGCCT TTGGTCATAG CTATTACAAA GGGATCCGCG ATTTAATTGC CCTATTTGCC
TATAAATTTG AAGCCGACGG TCGCAGTCGT TGTGATAAAT TGGCCGAATC AGTCGTGATT
GAGCTAAATG ACTATGAAAT ATTGGAAATT ACCGAGTCTG CCCATGAGCA GTATGGTTAC
CATTTTGAAG TCAAAAAATG TATTTCTCCC GCCTTTGGTC AGATGGCATC AACACCTAAG
TAG
 
Protein sequence
MVDSQHGLIL WKQRVRQVLT APKWLKHPFV TLKQFWQSLN VAQRCYLFAL MALMVFQPEI 
WIAAIITAIA LIIEFWPKFA MAWHTLAGKA IFLLFYAVIA NFALAASGSV VNEITGVSAS
HLSYTHNFAI LLYLPIWFVC ISILALLLLQ LVIPCYLFFH IGLRILGLEA KQQGSKKRFV
VTTALVRMIL SVVLLLNLVA ITDGENWVGD LAKKTQALKH DSIDKRVVNE GETILKAEDS
IEQAGTELTQ QPNQTDTTET LKAFGHSYYK GIRDLIALFA YKFEADGRSR CDKLAESVVI
ELNDYEILEI TESAHEQYGY HFEVKKCISP AFGQMASTPK