Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2399 |
Symbol | |
ID | 4479634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2878032 |
End bp | 2878547 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639726996 |
Product | protein tyrosine phosphatase |
Protein accession | YP_870034 |
Protein GI | 117920842 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.563268 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTAGAAG ATAGAGTGTT AGCAAAAGCA CAGTCAGTAC GACGTATTTT AATGGTCTGC ATGGGTAATA TTTGTCGCTC GCCCACCGCC GAGGCCGTTT GCCGCGCTAA AATTCGCGAG CGCCGTCTTA ATATCGAAGT CGATTCGGCG GGCACTATTG ATTACCACCA AGGGGATCAT CCCGACAGTC GCTCTATGGC TGCAGGTAAA AAACGCGGCT TGAGTTTCGA CGGCATGCGA GCAAGACAAG TGATTGATGC CGATTTTGAG CATTTCGATC TTATTTTAGC GGCAGATAAT AGCAATCTCG CGGATTTGCG CCGCCGTTGT CCACCCGAAT ATCAATACAA ATTAAAGTTG ATGCTGTCCT ATAGTGATTG CGACACGGAT GAGGTTCCCG ATCCCTATTA CGGTGGCACG CAAGGATTCG AATTAGTCCT CGATCTACTC GAACAGAGTA TGGACGCTTT ATTAGACCAG TTAGCCGGAA AAACGGATGG GAAGAATAAC GATTAA
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Protein sequence | MLEDRVLAKA QSVRRILMVC MGNICRSPTA EAVCRAKIRE RRLNIEVDSA GTIDYHQGDH PDSRSMAAGK KRGLSFDGMR ARQVIDADFE HFDLILAADN SNLADLRRRC PPEYQYKLKL MLSYSDCDTD EVPDPYYGGT QGFELVLDLL EQSMDALLDQ LAGKTDGKNN D
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