Gene Shewana3_2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2399 
Symbol 
ID4479634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2878032 
End bp2878547 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content47% 
IMG OID639726996 
Productprotein tyrosine phosphatase 
Protein accessionYP_870034 
Protein GI117920842 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.563268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTAGAAG ATAGAGTGTT AGCAAAAGCA CAGTCAGTAC GACGTATTTT AATGGTCTGC 
ATGGGTAATA TTTGTCGCTC GCCCACCGCC GAGGCCGTTT GCCGCGCTAA AATTCGCGAG
CGCCGTCTTA ATATCGAAGT CGATTCGGCG GGCACTATTG ATTACCACCA AGGGGATCAT
CCCGACAGTC GCTCTATGGC TGCAGGTAAA AAACGCGGCT TGAGTTTCGA CGGCATGCGA
GCAAGACAAG TGATTGATGC CGATTTTGAG CATTTCGATC TTATTTTAGC GGCAGATAAT
AGCAATCTCG CGGATTTGCG CCGCCGTTGT CCACCCGAAT ATCAATACAA ATTAAAGTTG
ATGCTGTCCT ATAGTGATTG CGACACGGAT GAGGTTCCCG ATCCCTATTA CGGTGGCACG
CAAGGATTCG AATTAGTCCT CGATCTACTC GAACAGAGTA TGGACGCTTT ATTAGACCAG
TTAGCCGGAA AAACGGATGG GAAGAATAAC GATTAA
 
Protein sequence
MLEDRVLAKA QSVRRILMVC MGNICRSPTA EAVCRAKIRE RRLNIEVDSA GTIDYHQGDH 
PDSRSMAAGK KRGLSFDGMR ARQVIDADFE HFDLILAADN SNLADLRRRC PPEYQYKLKL
MLSYSDCDTD EVPDPYYGGT QGFELVLDLL EQSMDALLDQ LAGKTDGKNN D