Gene Shewana3_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2388 
Symbol 
ID4479623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2867673 
End bp2868485 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content49% 
IMG OID639726985 
Producthypothetical protein 
Protein accessionYP_870023 
Protein GI117920831 
COG category[R] General function prediction only 
COG ID[COG4798] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.307249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.752026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TCACACTCGT CGCCAGTATG CTGATTGCTG GTTTATGTTC AGGTATGGCC 
TATGCCGATG AAGGCTTGGA TAAGGCCATT AAGAGCGAAT TTCGCCAAGC GAAAAACGCC
AGCCGCGATA TTTATCGTCA TCCCGCAGAA ACCCTCACAT TTTTTGGTAT CACCCCCACG
CAAACCGTGA TTGAACTCTG GCCTGGCAAT GGCTGGTACA CAGAAATCCT TGCCCCTTAT
CTTGCGCCTA AGGGGCAGTA TATTGCCGCC AGTTTCGAAA CTACCCCTAG CACGGACACC
CCAGGTAATC GCTATCGCGC CAATGCGGGC GTGAAATTCG ATACTTGGAT GACGGCCAAT
AAAGCCTTAT TTGGCAATGC GAAAATGGTG GTTCTCGACC CGCCTGCAAA AATGAATTTA
GGTGCCGATG GCAGTGCTGA CTTGGTATTA ACCTTCCGTA ACTTACATAA CTGGGCCTCA
AGCGATCAAC TCGAAAACGT GTTTGCCGCC TCCTATAAAG TGCTGAAAGA TGGCGGTGTG
TTTGGCGTGG TCGAACATAG AGCCAATAAA GGCATGAATA TGAGCACGGG TTACATGGAC
CAAGACGAGA TGATCGCGCT GGCCAAAAAG GTGGGTTTTA CCTTAGCAGA AAGCTCAGAA
ATCAACGCCA ATCCGAAAGA CACTAAGGAC TACGCCAAGG GGGTATGGAC GCTGCCACCT
TCGTTTGCCT TGGGCGATAC CGATAAGGAG AAATACCAAG CAATTGGTGA GAGCGATCGC
ATGACGCTCA AATTTATCAA AAAATCGCGC TAA
 
Protein sequence
MKKVTLVASM LIAGLCSGMA YADEGLDKAI KSEFRQAKNA SRDIYRHPAE TLTFFGITPT 
QTVIELWPGN GWYTEILAPY LAPKGQYIAA SFETTPSTDT PGNRYRANAG VKFDTWMTAN
KALFGNAKMV VLDPPAKMNL GADGSADLVL TFRNLHNWAS SDQLENVFAA SYKVLKDGGV
FGVVEHRANK GMNMSTGYMD QDEMIALAKK VGFTLAESSE INANPKDTKD YAKGVWTLPP
SFALGDTDKE KYQAIGESDR MTLKFIKKSR